Yonggang Shi, PhD

Title(s)Associate Professor of Neurology
SchoolKeck School of Medicine of Usc
AddressSHN, 2025 Zonal Ave.
Health Sciences Campus
Los Angeles CA 90033
Phone+1 323 442 7246
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    Collapse Overview 
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    Collapse Research 
    Collapse Research Activities and Funding
    Imaging Cerebral Small Vessels in Vascular Cognitive Impairment and Dementia (VCID)
    NIH RF1AG084072Sep 1, 2023 - Aug 31, 2026
    Role: Co-PI
    Shape-based personalized AT(N) imaging markers of Alzheimer's disease
    NIH RF1AG077578Jun 1, 2023 - May 31, 2026
    Role: Principal Investigator
    Tau-induced connectome imaging markers of Alzheimer's disease
    NIH RF1AG064584Sep 1, 2020 - Aug 31, 2024
    Role: Principal Investigator
    Tau-associated pathological changes in reward networks for the prediction of neuropsychiatric symptoms in Alzheimer?s disease
    NIH R21AG064776Sep 1, 2019 - May 31, 2021
    Role: Principal Investigator
    Brainstem connectomes related to Alzheimer's disease
    NIH RF1AG056573Jul 1, 2018 - Mar 31, 2023
    Role: Principal Investigator
    3D OCT Angiography for quantitative characterization of diabetic retinopathy
    NIH/NEI R21EY027879Apr 1, 2017 - Mar 31, 2019
    Role: Principal Investigator
    Surface-Based Fiber Tracking and Modeling Techniques for Mapping the Superficial White Matter Connectome with Diffusion MRI
    NIH R01EB022744Sep 22, 2016 - Jan 31, 2027
    Role: Principal Investigator
    Human Connectomes for Low Vision, Blindness, and Sight Restoration
    NIH U01EY025864Sep 1, 2015 - Aug 31, 2021
    Role: Principal Investigator
    Intrinsic Modeling and Tracking of Neuroanatomy in Alzheimer's Disease
    NIH K01EB013633Apr 1, 2012 - Mar 31, 2017
    Role: Principal Investigator

    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Diffusion MRI harmonization via personalized template mapping. Hum Brain Mapp. 2024 Apr; 45(5):e26661. Xia Y, Shi Y. PMID: 38520363; PMCID: PMC10960558.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    2. Automated Mapping of Residual Distortion Severity in Diffusion MRI. Comput Diffus MRI. 2023; 14328:58-69. Huang S, Zhong L, Shi Y. PMID: 38500569; PMCID: PMC10948104.
      View in: PubMed   Mentions: 1  
    3. FASSt : Filtering via Symmetric Autoencoder for Spherical Superficial White Matter Tractography. Comput Diffus MRI. 2023 Oct; 14328:129-139. Li Y, Nie X, Fu Y, Shi Y. PMID: 38500570; PMCID: PMC10948089.
      View in: PubMed   Mentions:
    4. Vessel density mapping of small cerebral vessels on 3D high resolution black blood MRI. Neuroimage. 2024 Feb 01; 286:120504. Sarabi MS, Ma SJ, Jann K, Ringman JM, Wang DJJ, Shi Y. PMID: 38216104; PMCID: PMC10834860.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    5. Flow-based Geometric Interpolation of Fiber Orientation Distribution Functions. Med Image Comput Comput Assist Interv. 2023 Oct; 14227:46-55. Nie X, Shi Y. PMID: 38549783; PMCID: PMC10978007.
      View in: PubMed   Mentions:    Fields:    
    6. Uncovering Heterogeneity in Alzheimer's Disease from Graphical Modeling of the Tau Spatiotemporal Topography. Med Image Comput Comput Assist Interv. 2023 Oct; 14224:262-271. Yue J, Shi Y. PMID: 38510994; PMCID: PMC10951551.
      View in: PubMed   Mentions:    Fields:    
    7. Personalized Patch-based Normality Assessment of Brain Atrophy in Alzheimer's Disease. Med Image Comput Comput Assist Interv. 2023 Oct; 14224:55-62. Zhang J, Shi Y. PMID: 38501074; PMCID: PMC10948101.
      View in: PubMed   Mentions: 1     Fields:    
    8. Shape-Aware 3D Small Vessel Segmentation with Local Contrast Guided Attention. Med Image Comput Comput Assist Interv. 2023 Oct; 14223:354-363. Deng Z, Xu S, Zhang J, Zhang J, Wang DJ, Yan L, Shi Y. PMID: 38500803; PMCID: PMC10948105.
      View in: PubMed   Mentions:    Fields:    
    9. Retinotopic degeneration of the retina and optic tracts in autosomal dominant Alzheimer's disease. Alzheimers Dement. 2023 11; 19(11):5103-5113. Adhikari S, Qiao Y, Singer M, Sagare A, Jiang X, Shi Y, Ringman JM, Kashani AH. PMID: 37102308; PMCID: PMC10603214.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    10. Sight restoration reverses blindness-induced cross-modal functional connectivity changes between the visual and somatosensory cortex at rest. Front Neurosci. 2022; 16:902866. Nadvar N, Stiles N, Choupan J, Patel V, Ameri H, Shi Y, Liu Z, Jonides J, Weiland J. PMID: 36213743; PMCID: PMC9539921.
      View in: PubMed   Mentions:
    11. Hippocampal asymmetry of regional development and structural covariance in preterm neonates. Cereb Cortex. 2022 Sep 19; 32(19):4271-4283. Ge X, Zheng Y, Qiao Y, Pan N, Simon JP, Lee M, Jiang W, Kim H, Shi Y, Liu M. PMID: 34969086.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    12. Personalized dMRI Harmonization on Cortical Surface. Med Image Comput Comput Assist Interv. 2022 Sep; 13436:717-725. Xia Y, Shi Y. PMID: 38500664; PMCID: PMC10948117.
      View in: PubMed   Mentions:    Fields:    
    13. Retinal ganglion cell endowment is correlated with optic tract fiber cross section, not density. Neuroimage. 2022 Oct 15; 260:119495. Taskin HO, Qiao Y, Sydnor VJ, Cieslak M, Haggerty EB, Satterthwaite TD, Morgan JI, Shi Y, Aguirre GK. PMID: 35868617; PMCID: PMC10362491.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    14. Exploratory imaging outcomes of a phase 1b/2a clinical trial of allopregnanolone as a regenerative therapeutic for Alzheimer's disease: Structural effects and functional connectivity outcomes. Alzheimers Dement (N Y). 2022; 8(1):e12258. Raikes AC, Hernandez GD, Matthews DC, Lukic AS, Law M, Shi Y, Schneider LS, Brinton RD. PMID: 35310526; PMCID: PMC8919249.
      View in: PubMed   Mentions: 3  
    15. Age differences in diffusivity in the locus coeruleus and its ascending noradrenergic tract. Neuroimage. 2022 05 01; 251:119022. Porat S, Sibilia F, Yoon J, Shi Y, Dahl MJ, Werkle-Bergner M, Düzel S, Bodammer N, Lindenberger U, Kühn S, Mather M. PMID: 35192943; PMCID: PMC9183949.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    16. Enhanced Association of Tau Pathology and Cognitive Impairment in Mild Cognitive Impairment Subjects with Behavior Symptoms. J Alzheimers Dis. 2022; 87(2):557-568. Ge X, Qiao Y, Choi J, Raman R, Ringman JM, Shi Y, for Alzheimer’s Disease Neuroimaging Initiative. PMID: 35342088; PMCID: PMC9548450.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    17. Locus coeruleus integrity is related to tau burden and memory loss in autosomal-dominant Alzheimer's disease. Neurobiol Aging. 2022 04; 112:39-54. Dahl MJ, Mather M, Werkle-Bergner M, Kennedy BL, Guzman S, Hurth K, Miller CA, Qiao Y, Shi Y, Chui HC, Ringman JM. PMID: 35045380; PMCID: PMC8976827.
      View in: PubMed   Mentions: 38     Fields:    Translation:Humans
    18. Mapping Complex Brain Torque Components and Their Genetic Architecture and Phenomic Associations in 24,112 Individuals. Biol Psychiatry. 2022 04 15; 91(8):753-768. Zhao L, Matloff W, Shi Y, Cabeen RP, Toga AW. PMID: 35027165; PMCID: PMC8957509.
      View in: PubMed   Mentions: 10     Fields:    Translation:Humans
    19. Retinal Venular Tortuosity Jointly with Retinal Amyloid Burden Correlates with Verbal Memory Loss: A Pilot Study. Cells. 2021 10 28; 10(11). Dumitrascu OM, Rosenberry R, Sherman DS, Khansari MM, Sheyn J, Torbati T, Sherzai A, Sherzai D, Johnson KO, Czeszynski AD, Verdooner S, Black KL, Frautschy S, Lyden PD, Shi Y, Cheng S, Koronyo Y, Koronyo-Hamaoui M. PMID: 34831149; PMCID: PMC8616417.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    20. Using Fractional Anisotropy Imaging to Detect Mild Cognitive Impairment and Alzheimer's Disease among Mexican Americans and Non-Hispanic Whites: A HABLE Study. Dement Geriatr Cogn Disord. 2021; 50(3):266-273. Hall JR, Johnson LA, Zhang F, Petersen M, Toga AW, Shi Y, Mason D, Rissman RA, Yaffe K, O'Bryant SE, HABLE Study. PMID: 34569492; PMCID: PMC8559764.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    21. The Health & Aging Brain among Latino Elders (HABLE) study methods and participant characteristics. Alzheimers Dement (Amst). 2021; 13(1):e12202. O'Bryant SE, Johnson LA, Barber RC, Braskie MN, Christian B, Hall JR, Hazra N, King K, Kothapalli D, Large S, Mason D, Matsiyevskiy E, McColl R, Nandy R, Palmer R, Petersen M, Philips N, Rissman RA, Shi Y, Toga AW, Vintimilla R, Vig R, Zhang F, Yaffe K, HABLE Study Team. PMID: 34189247; PMCID: PMC8215806.
      View in: PubMed   Mentions: 34  
    22. Past, present and future role of retinal imaging in neurodegenerative disease. Prog Retin Eye Res. 2021 07; 83:100938. Kashani AH, Asanad S, Chan JW, Singer MB, Zhang J, Sharifi M, Khansari MM, Abdolahi F, Shi Y, Biffi A, Chui H, Ringman JM. PMID: 33460813; PMCID: PMC8280255.
      View in: PubMed   Mentions: 43     Fields:    Translation:Humans
    23. Retrospective motion artifact correction of structural MRI images using deep learning improves the quality of cortical surface reconstructions. Neuroimage. 2021 04 15; 230:117756. Duffy BA, Zhao L, Sepehrband F, Min J, Wang DJ, Shi Y, Toga AW, Kim H, Alzheimer's Disease Neuroimaging Initiative. PMID: 33460797; PMCID: PMC8044025.
      View in: PubMed   Mentions: 16     Fields:    Translation:Humans
    24. Safety, tolerability, and pharmacokinetics of allopregnanolone as a regenerative therapeutic for Alzheimer's disease: A single and multiple ascending dose phase 1b/2a clinical trial. Alzheimers Dement (N Y). 2020; 6(1):e12107. Hernandez GD, Solinsky CM, Mack WJ, Kono N, Rodgers KE, Wu CY, Mollo AR, Lopez CM, Pawluczyk S, Bauer G, Matthews D, Shi Y, Law M, Rogawski MA, Schneider LS, Brinton RD. PMID: 33344752; PMCID: PMC7744018.
      View in: PubMed   Mentions: 10  
    25. The effect of body mass index on hippocampal morphology and memory performance in late childhood and adolescence. Hippocampus. 2021 02; 31(2):189-200. Lynch KM, Page KA, Shi Y, Xiang AH, Toga AW, Clark KA. PMID: 33174346; PMCID: PMC9006989.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    26. Unsupervised Deep Learning for Susceptibility Distortion Correction in Connectome Imaging. Med Image Comput Comput Assist Interv. 2020; 12267:302-310. Qiao Y, Shi Y. PMID: 34458893; PMCID: PMC8389771.
      View in: PubMed   Mentions: 2     Fields:    
    27. Emotional detachment, gait ataxia, and cerebellar dysconnectivity associated with compound heterozygous mutations in the SPG7 gene. Neurocase. 2020 10; 26(5):299-304. Ringman JM, Qiao Y, Garbin A, Fisher BE, Fogel B, Watari Knoell K, Chui HC, Shi Y, Rexach JE. PMID: 32893728; PMCID: PMC7530119.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    28. A probabilistic atlas of locus coeruleus pathways to transentorhinal cortex for connectome imaging in Alzheimer's disease. Neuroimage. 2020 12; 223:117301. Sun W, Tang Y, Qiao Y, Ge X, Mather M, Ringman JM, Shi Y, for Alzheimer's Disease Neuroimaging Initiative. PMID: 32861791; PMCID: PMC7797167.
      View in: PubMed   Mentions: 20     Fields:    Translation:Humans
    29. Groupwise track filtering via iterative message passing and pruning. Neuroimage. 2020 11 01; 221:117147. Xia Y, Shi Y. PMID: 32673747; PMCID: PMC7780547.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    30. Relationship between retinal vessel tortuosity and oxygenation in sickle cell retinopathy. Int J Retina Vitreous. 2019; 5:47. Khansari MM, Garvey SL, Farzad S, Shi Y, Shahidi M. PMID: 31832241; PMCID: PMC6859621.
      View in: PubMed   Mentions: 4  
    31. Morphometric development of the human fetal cerebellum during the early second trimester. Neuroimage. 2020 02 15; 207:116372. Xu F, Ge X, Shi Y, Zhang Z, Tang Y, Lin X, Teng G, Zang F, Gao N, Liu H, Toga AW, Liu S. PMID: 31751665; PMCID: PMC7055298.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    32. Topographic Filtering of Tractograms as Vector Field Flows. Med Image Comput Comput Assist Interv. 2019; 11766:564-572. Nie X, Shi Y. PMID: 33860289; PMCID: PMC8046176.
      View in: PubMed   Mentions: 2     Fields:    
    33. Surface-based Tracking of U-fibers in the Superficial White Matter. Med Image Comput Comput Assist Interv. 2019; 11766:538-546. Gahm JK, Shi Y. PMID: 33860288; PMCID: PMC8046261.
      View in: PubMed   Mentions: 2     Fields:    
    34. 3D Surface-Based Geometric and Topological Quantification of Retinal Microvasculature in OCT-Angiography via Reeb Analysis. Med Image Comput Comput Assist Interv. 2019; 11764:57-65. Zhang J, Kashani AH, Shi Y. PMID: 33860287; PMCID: PMC8045407.
      View in: PubMed   Mentions: 2     Fields:    
    35. FOD-based registration for susceptibility distortion correction in brainstem connectome imaging. Neuroimage. 2019 11 15; 202:116164. Qiao Y, Sun W, Shi Y. PMID: 31505273; PMCID: PMC6819272.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    36. Hippocampal Shape Maturation in Childhood and Adolescence. Cereb Cortex. 2019 08 14; 29(9):3651-3665. Lynch KM, Shi Y, Toga AW, Clark KA, Pediatric Imaging, Neurocognition and Genetics Study. PMID: 30272143; PMCID: PMC6686754.
      View in: PubMed   Mentions: 12     Fields:    Translation:Humans
    37. Characterization of lenticulostriate arteries with high resolution black-blood T1-weighted turbo spin echo with variable flip angles at 3 and 7 Tesla. Neuroimage. 2019 10 01; 199:184-193. Ma SJ, Sarabi MS, Yan L, Shao X, Chen Y, Yang Q, Jann K, Toga AW, Shi Y, Wang DJJ. PMID: 31158475; PMCID: PMC6688958.
      View in: PubMed   Mentions: 17     Fields:    Translation:Humans
    38. Limits to anatomical accuracy of diffusion tractography using modern approaches. Neuroimage. 2019 01 15; 185:1-11. Schilling KG, Nath V, Hansen C, Parvathaneni P, Blaber J, Gao Y, Neher P, Aydogan DB, Shi Y, Ocampo-Pineda M, Schiavi S, Daducci A, Girard G, Barakovic M, Rafael-Patino J, Romascano D, Rensonnet G, Pizzolato M, Bates A, Fischi E, Thiran JP, Canales-Rodríguez EJ, Huang C, Zhu H, Zhong L, Cabeen R, Toga AW, Rheault F, Theaud G, Houde JC, Sidhu J, Chamberland M, Westin CF, Dyrby TB, Verma R, Rathi Y, Irfanoglu MO, Thomas C, Pierpaoli C, Descoteaux M, Anderson AW, Landman BA. PMID: 30317017; PMCID: PMC6551229.
      View in: PubMed   Mentions: 102     Fields:    Translation:Humans
    39. FOD-based Registration for Susceptibility Distortion Correction in Connectome Imaging. Connect Neuroimaging (2018). 2018; 11083:11-19. Qiao Y, Sun W, Shi Y. PMID: 31559395; PMCID: PMC6761993.
      View in: PubMed   Mentions: 2  
    40. GIFE: Efficient and Robust Group-wise Isometric Fiber Embedding. Connect Neuroimaging (2018). 2018 Sep; 11083:20-28. Wang J, Shi Y. PMID: 31468034; PMCID: PMC6715136.
      View in: PubMed   Mentions:
    41. Patch-based Mapping of Transentorhinal Cortex with a Distributed Atlas. Med Image Comput Comput Assist Interv. 2018 Sep; 11072:689-697. Gahm JK, Tang Y, Shi Y. PMID: 30957108; PMCID: PMC6447296.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    42. Modeling topographic regularity in structural brain connectivity with application to tractogram filtering. Neuroimage. 2018 12; 183:87-98. Wang J, Aydogan DB, Varma R, Toga AW, Shi Y. PMID: 30081193; PMCID: PMC6197890.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    43. Tracking and validation techniques for topographically organized tractography. Neuroimage. 2018 11 01; 181:64-84. Aydogan DB, Shi Y. PMID: 29986834; PMCID: PMC6139055.
      View in: PubMed   Mentions: 9     Fields:    Translation:Humans
    44. When tractography meets tracer injections: a systematic study of trends and variation sources of diffusion-based connectivity. Brain Struct Funct. 2018 Jul; 223(6):2841-2858. Aydogan DB, Jacobs R, Dulawa S, Thompson SL, Francois MC, Toga AW, Dong H, Knowles JA, Shi Y. PMID: 29663135; PMCID: PMC5997540.
      View in: PubMed   Mentions: 35     Fields:    Translation:AnimalsCells
    45. Riemannian metric optimization on surfaces (RMOS) for intrinsic brain mapping in the Laplace-Beltrami embedding space. Med Image Anal. 2018 05; 46:189-201. Gahm JK, Shi Y, Alzheimer’s Disease Neuroimaging Initiative. PMID: 29574399; PMCID: PMC5910235.
      View in: PubMed   Mentions: 9     Fields:    Translation:Humans
    46. Multivariate Classification of Major Depressive Disorder Using the Effective Connectivity and Functional Connectivity. Front Neurosci. 2018; 12:38. Geng X, Xu J, Liu B, Shi Y. PMID: 29515348; PMCID: PMC5825897.
      View in: PubMed   Mentions: 24  
    47. Thalamic atrophy in multiple sclerosis: A magnetic resonance imaging marker of neurodegeneration throughout disease. Ann Neurol. 2018 02; 83(2):223-234. Azevedo CJ, Cen SY, Khadka S, Liu S, Kornak J, Shi Y, Zheng L, Hauser SL, Pelletier D. PMID: 29328531; PMCID: PMC6317847.
      View in: PubMed   Mentions: 90     Fields:    Translation:Humans
    48. A probabilistic atlas of human brainstem pathways based on connectome imaging data. Neuroimage. 2018 04 01; 169:227-239. Tang Y, Sun W, Toga AW, Ringman JM, Shi Y. PMID: 29253653; PMCID: PMC5856609.
      View in: PubMed   Mentions: 35     Fields:    Translation:Humans
    49. Kernel-Regularized ICA for Computing Functional Topography from Resting-state fMRI. Med Image Comput Comput Assist Interv. 2017 Sep; 10433:373-381. Wang J, Shi Y. PMID: 29071309; PMCID: PMC5653260.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    50. FOD Restoration for Enhanced Mapping of White Matter Lesion Connectivity. Med Image Comput Comput Assist Interv. 2017 Sep; 10433:584-592. Sun W, Amezcua L, Shi Y. PMID: 29046903; PMCID: PMC5643028.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    51. Holistic Mapping of Striatum Surfaces in the Laplace-Beltrami Embedding Space. Med Image Comput Comput Assist Interv. 2017 Sep; 10433:21-30. Gahm JK, Shi Y. PMID: 29046902; PMCID: PMC5642990.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansAnimals
    52. Optical coherence tomography angiography: A comprehensive review of current methods and clinical applications. Prog Retin Eye Res. 2017 09; 60:66-100. Kashani AH, Chen CL, Gahm JK, Zheng F, Richter GM, Rosenfeld PJ, Shi Y, Wang RK. PMID: 28760677; PMCID: PMC5600872.
      View in: PubMed   Mentions: 370     Fields:    Translation:Humans
    53. Topographic Regularity for Tract Filtering in Brain Connectivity. Inf Process Med Imaging. 2017 Jun; 10265:263-274. Wang J, Aydogan DB, Varma R, Toga AW, Shi Y. PMID: 28943732; PMCID: PMC5609858.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    54. Preface. Comput Med Imaging Graph. 2017 Jan; 55:1. Chen X, Li S, Trucco E, Liu JJ, Shi Y, Zou B. PMID: 28063502.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    55. Topological false discovery rates for brain mapping based on signal height. Neuroimage. 2018 02 15; 167:478-487. Li J, Gahm JK, Shi Y, Toga AW. PMID: 27838286; PMCID: PMC5423870.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    56. Probabilistic Tractography for Topographically Organized Connectomes. Med Image Comput Comput Assist Interv. 2016 Oct; 9900:201-209. Aydogan DB, Shi Y. PMID: 28090602; PMCID: PMC5228070.
      View in: PubMed   Mentions: 11     Fields:    Translation:Humans
    57. Riemannian Metric Optimization for Connectivity-driven Surface Mapping. Med Image Comput Comput Assist Interv. 2016 Oct; 9900:228-236. Gahm JK, Shi Y. PMID: 28083569; PMCID: PMC5223768.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    58. Phenotypic and Genetic Correlations Between the Lobar Segments of the Inferior Fronto-occipital Fasciculus and Attention. Sci Rep. 2016 09 06; 6:33015. Leng Y, Shi Y, Yu Q, Van Horn JD, Tang H, Li J, Xu W, Ge X, Tang Y, Han Y, Zhang D, Xiao M, Zhang H, Pang Z, Toga AW, Liu S. PMID: 27597294; PMCID: PMC5011720.
      View in: PubMed   Mentions: 6     Fields:    Translation:Humans
    59. Mapping Brain Anatomical Connectivity Using Diffusion Magnetic Resonance Imaging: Structural connectivity of the human brain. IEEE Signal Process Mag. 2016 May; 33(3):36-51. Li J, Shi Y, Toga AW. PMID: 27212872; PMCID: PMC4869891.
      View in: PubMed   Mentions: 6  
    60. Brainhack: a collaborative workshop for the open neuroscience community. Gigascience. 2016; 5:16. Cameron Craddock R, S Margulies D, Bellec P, Nolan Nichols B, Alcauter S, A Barrios F, Burnod Y, J Cannistraci C, Cohen-Adad J, De Leener B, Dery S, Downar J, Dunlop K, R Franco A, Seligman Froehlich C, J Gerber A, S Ghosh S, J Grabowski T, Hill S, Sólon Heinsfeld A, Matthew Hutchison R, Kundu P, R Laird A, Liew SL, J Lurie D, G McLaren D, Meneguzzi F, Mennes M, Mesmoudi S, O'Connor D, H Pasaye E, Peltier S, Poline JB, Prasad G, Fraga Pereira R, Quirion PO, Rokem A, S Saad Z, Shi Y, C Strother S, Toro R, Q Uddin L, D Van Horn J, W Van Meter J, C Welsh R, Xu T. PMID: 27042293; PMCID: PMC4818387.
      View in: PubMed   Mentions: 18     Fields:    Translation:Humans
    61. Feasibility of Structural and Functional MRI Acquisition with Unpowered Implants in Argus II Retinal Prosthesis Patients: A Case Study. Transl Vis Sci Technol. 2015 Dec; 4(6):6. Cunningham SI, Shi Y, Weiland JD, Falabella P, Olmos de Koo LC, Zacks DN, Tjan BS. PMID: 26693097; PMCID: PMC4675319.
      View in: PubMed   Mentions: 10     Fields:    
    62. Track Filtering via Iterative Correction of TDI Topology. Med Image Comput Comput Assist Interv. 2015 Oct; 9349:20-27. Aydogan DB, Shi Y. PMID: 26798847; PMCID: PMC4718581.
      View in: PubMed   Mentions: 4     Fields:    
    63. Automated retinofugal visual pathway reconstruction with multi-shell HARDI and FOD-based analysis. Neuroimage. 2016 Jan 15; 125:767-779. Kammen A, Law M, Tjan BS, Toga AW, Shi Y. PMID: 26551261; PMCID: PMC4691391.
      View in: PubMed   Mentions: 31     Fields:    Translation:Humans
    64. Development of the human fetal hippocampal formation during early second trimester. Neuroimage. 2015 Oct 01; 119:33-43. Ge X, Shi Y, Li J, Zhang Z, Lin X, Zhan J, Ge H, Xu J, Yu Q, Leng Y, Teng G, Feng L, Meng H, Tang Y, Zang F, Toga AW, Liu S. PMID: 26123377; PMCID: PMC4710366.
      View in: PubMed   Mentions: 21     Fields:    Translation:Humans
    65. AUTOMATED MULTI-ATLAS LABELING OF THE FORNIX AND ITS INTEGRITY IN ALZHEIMER'S DISEASE. Proc IEEE Int Symp Biomed Imaging. 2015 Apr; 2015:140-143. Jin Y, Shi Y, Zhan L, Thompson PM, Alzheimer’s Disease Neuroimaging Initiative (ADNI). PMID: 26413203; PMCID: PMC4578317.
      View in: PubMed   Mentions: 19  
    66. Automatic clustering of white matter fibers in brain diffusion MRI with an application to genetics. Neuroimage. 2014 Oct 15; 100:75-90. Jin Y, Shi Y, Zhan L, Gutman BA, de Zubicaray GI, McMahon KL, Wright MJ, Toga AW, Thompson PM. PMID: 24821529; PMCID: PMC4255631.
      View in: PubMed   Mentions: 60     Fields:    Translation:HumansCells
    67. Technological advances in neuroimaging: neurosurgical applications for the future. World Neurosurg. 2014; 82(1-2):32-4. Shi Y, Kammen A, Law M. PMID: 24793561.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
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