Darryl Shibata, MD

Title(s)Professor of Pathology
SchoolKeck School of Medicine of Usc
AddressNOR 1441 Eastlake Ave
Health Sciences Campus
Los Angeles CA 90089-9092
Phone+1 323 865 3298
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    Other Positions
    Title(s)Vice Chair of Academic Affairs, Department of Pathology,


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    After attending UCLA for his undergraduate degree, Dr. Shibata obtained his medical degree from the Keck School of Medicine of USC. After completing his internship training in pediatrics from UC San Diego, Dr. Shibata returned to USC for his residency and fellowship at LAC+USC Medical Center. Currently, Dr. Shibata has clinical appointments at both LAC+USC Medical Center and USC/Norris Comprehensive Cancer Center. In addition to his wide array of responsibilities in the research, education and practitioner capacities, Dr. Shibata sits on the editorial board of the BMC Cancer Journal and the American Journal of Pathology.

    Collapse Research 
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    Arizona Cancer and Evolution Center (ACE)
    NIH U54CA217376Apr 12, 2018 - Mar 31, 2023
    Role: Co-Principal Investigator
    Born to be Bad: Is Abnormal Cell Mobility Already Present At Initiation?
    NIH R21CA185016Jul 30, 2014 - May 31, 2018
    Role: Principal Investigator
    How Do NSAIDs Prevent Colorectal Cancer
    NIH R21CA170814Sep 13, 2012 - Aug 31, 2015
    Role: Principal Investigator
    Tumor Diversity As A Biomarker For Colorectal Cancer
    NIH R21CA149990Apr 1, 2010 - Mar 31, 2014
    Role: Principal Investigator
    How Do Colorectal Cancers Arise Despite Surveillance?
    NIH R33CA111940Aug 1, 2005 - Jun 30, 2010
    Role: Principal Investigator
    HUMAN COLON STEM CELL AND CRYPT DYNAMICS
    NIH R21DK061140Sep 30, 2001 - Aug 31, 2005
    Role: Principal Investigator
    Fixing Fixed DNA
    NIH R21CA091301Jul 1, 2001 - Jun 30, 2004
    Role: Principal Investigator
    Mouse Models of Early Intestinal Neoplasia
    NIH R01CA080077Jan 1, 1999 - Mar 31, 2010
    Role: Principal Investigator
    PATHOLOGY OF TUMOR GROWTH
    NIH R01CA070858May 21, 1997 - Apr 30, 2001
    Role: Principal Investigator
    PATHOLOGY OF TUMOR GROWTH
    NIH R55CA070858Sep 15, 1996 - Apr 30, 1997
    Role: Principal Investigator
    PATHOLOGY OF GASTRIC CANCER
    NIH R01CA058704Feb 1, 1993 - Jan 31, 1999
    Role: Principal Investigator

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    Collapse Bibliographic 
    Collapse Publications
    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Human Brain Barcodes. bioRxiv. 2024 Jul 17. Shibata D. PMID: 39071290; PMCID: PMC11275915.
      View in: PubMed   Mentions:
    2. Developmental hematopoietic stem cell variation explains clonal hematopoiesis later in life. bioRxiv. 2024 Mar 05. Kreger J, Mooney JA, Shibata D, MacLean AL. PMID: 38496542; PMCID: PMC10942294.
      View in: PubMed   Mentions:
    3. Editorial Expression of Concern: Adenomatous polyposis coli (APC) regulates miR17-92 cluster through β-catenin pathway in colorectal cancer. Oncogene. 2024 Mar; 43(11):837. Li Y, Lauriola M, Kim D, Francesconi M, D'Uva G, Shibata D, Malafa MP, Yeatman TJ, Coppola D, Solmi R, Cheng JQ. PMID: 38378921.
      View in: PubMed   Mentions:    Fields:    
    4. Testing Adaptive Therapy Protocols Using Gemcitabine and Capecitabine in a Preclinical Model of Endocrine-Resistant Breast Cancer. Cancers (Basel). 2024 Jan 06; 16(2). Seyedi S, Teo R, Foster L, Saha D, Mina L, Northfelt D, Anderson KS, Shibata D, Gatenby R, Cisneros LH, Troan B, Anderson ARA, Maley CC. PMID: 38254748; PMCID: PMC10813385.
      View in: PubMed   Mentions: 2  
    5. Growth Dynamics of Ductal Carcinoma in Situ Recapitulate Normal Breast Development. bioRxiv. 2023 Oct 02. Ryser MD, Greenwald MA, Sorribes IC, King LM, Hall A, Geradts J, Weaver DL, Mallo D, Holloway S, Monyak D, Gumbert G, Vaez-Ghaemi S, Wu E, Murgas K, Grimm LJ, Maley CC, Marks JR, Shibata D, Hwang ES. PMID: 37873488; PMCID: PMC10592867.
      View in: PubMed   Mentions:
    6. Testing Adaptive Therapy Protocols using Gemcitabine and Capecitabine on a Mouse Model of Endocrine-Resistant Breast Cancer. bioRxiv. 2023 Sep 22. Seyedi S, Teo R, Foster L, Saha D, Mina L, Northfelt D, Anderson KS, Shibata D, Gatenby R, Cisneros L, Troan B, Anderson ARA, Maley CC. PMID: 37781632; PMCID: PMC10541126.
      View in: PubMed   Mentions:
    7. The co-evolution of the genome and epigenome in colorectal cancer. Nature. 2022 11; 611(7937):733-743. Heide T, Househam J, Cresswell GD, Spiteri I, Lynn C, Mossner M, Kimberley C, Fernandez-Mateos J, Chen B, Zapata L, James C, Barozzi I, Chkhaidze K, Nichol D, Gunasri V, Berner A, Schmidt M, Lakatos E, Baker AM, Costa H, Mitchinson M, Piazza R, Jansen M, Caravagna G, Ramazzotti D, Shibata D, Bridgewater J, Rodriguez-Justo M, Magnani L, Graham TA, Sottoriva A. PMID: 36289335; PMCID: PMC9684080.
      View in: PubMed   Mentions: 28     Fields:    Translation:HumansCells
    8. Phenotypic plasticity and genetic control in colorectal cancer evolution. Nature. 2022 11; 611(7937):744-753. Househam J, Heide T, Cresswell GD, Spiteri I, Kimberley C, Zapata L, Lynn C, James C, Mossner M, Fernandez-Mateos J, Vinceti A, Baker AM, Gabbutt C, Berner A, Schmidt M, Chen B, Lakatos E, Gunasri V, Nichol D, Costa H, Mitchinson M, Ramazzotti D, Werner B, Iorio F, Jansen M, Caravagna G, Barnes CP, Shibata D, Bridgewater J, Rodriguez-Justo M, Magnani L, Sottoriva A, Graham TA. PMID: 36289336; PMCID: PMC9684078.
      View in: PubMed   Mentions: 40     Fields:    Translation:HumansCells
    9. Homeostasis limits keratinocyte evolution. Proc Natl Acad Sci U S A. 2022 08 30; 119(35):e2006487119. Schenck RO, Kim E, Bravo RR, West J, Leedham S, Shibata D, Anderson ARA. PMID: 35998218; PMCID: PMC9436311.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansCells
    10. Lineage tracing in human tissues. J Pathol. 2022 07; 257(4):501-512. Gabbutt C, Wright NA, Baker AM, Shibata D, Graham TA. PMID: 35415852; PMCID: PMC9253082.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    11. Gattaca: Base-Pair Resolution Mutation Tracking for Somatic Evolution Studies using Agent-based Models. Mol Biol Evol. 2022 04 11; 39(4). Schenck RO, Brosula G, West J, Leedham S, Shibata D, Anderson ARA. PMID: 35298641; PMCID: PMC9034688.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    12. Fluctuating methylation clocks for cell lineage tracing at high temporal resolution in human tissues. Nat Biotechnol. 2022 05; 40(5):720-730. Gabbutt C, Schenck RO, Weisenberger DJ, Kimberley C, Berner A, Househam J, Lakatos E, Robertson-Tessi M, Martin I, Patel R, Clark SK, Latchford A, Barnes CP, Leedham SJ, Anderson ARA, Graham TA, Shibata D. PMID: 34980912; PMCID: PMC9110299.
      View in: PubMed   Mentions: 18     Fields:    Translation:HumansCells
    13. A Bayesian hierarchical model to estimate DNA methylation conservation in colorectal tumors. Bioinformatics. 2021 12 22; 38(1):22-29. Murgas KA, Ma Y, Shahidi LK, Mukherjee S, Allen AS, Shibata D, Ryser MD. PMID: 34487148; PMCID: PMC10060692.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    14. Functional human genes typically exhibit epigenetic conservation. PLoS One. 2021; 16(9):e0253250. Rud D, Marjoram P, Siegmund K, Shibata D. PMID: 34520456; PMCID: PMC8439480.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    15. Navigating the path to distant metastasis. Nat Genet. 2020 07; 52(7):642-643. Graham TA, Shibata D. PMID: 32632324; PMCID: PMC7747770.
      View in: PubMed   Mentions: 4     Fields:    
    16. Visualizing Human Colorectal Cancer Intratumor Heterogeneity with Phylogeography. iScience. 2020 Jul 24; 23(7):101304. Shibata D. PMID: 32623333; PMCID: PMC7334596.
      View in: PubMed   Mentions: 5  
    17. Deep learned tissue "fingerprints" classify breast cancers by ER/PR/Her2 status from H&E images. Sci Rep. 2020 04 29; 10(1):7275. Rawat RR, Ortega I, Roy P, Sha F, Shibata D, Ruderman D, Agus DB. PMID: 32350370; PMCID: PMC7190637.
      View in: PubMed   Mentions: 36     Fields:    Translation:Humans
    18. Minimal barriers to invasion during human colorectal tumor growth. Nat Commun. 2020 03 09; 11(1):1280. Ryser MD, Mallo D, Hall A, Hardman T, King LM, Tatishchev S, Sorribes IC, Maley CC, Marks JR, Hwang ES, Shibata D. PMID: 32152322; PMCID: PMC7062901.
      View in: PubMed   Mentions: 19     Fields:    Translation:HumansCells
    19. Epigenetic Conservation Is a Beacon of Function: An Analysis Using Methcon5 Software for Studying Gene Methylation. JCO Clin Cancer Inform. 2020 02; 4:100-107. Hvitfeldt E, Xia C, Siegmund KD, Shibata D, Marjoram P. PMID: 32078366; PMCID: PMC7049248.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    20. Mutational signatures in colon cancer. BMC Res Notes. 2019 Dec 03; 12(1):788. Pandey P, Yang Z, Shibata D, Marjoram P, Siegmund KD. PMID: 31796096; PMCID: PMC6889194.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    21. HiLDA: a statistical approach to investigate differences in mutational signatures. PeerJ. 2019; 7:e7557. Yang Z, Pandey P, Shibata D, Conti DV, Marjoram P, Siegmund KD. PMID: 31523512; PMCID: PMC6717498.
      View in: PubMed   Mentions: 2     Fields:    
    22. Cancer cell evolution through the ages. Science. 2019 08 02; 365(6452):440-441. Maley CC, Shibata D. PMID: 31371596; PMCID: PMC7449598.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    23. Tumorigenesis as the Paradigm of Quasi-neutral Molecular Evolution. Mol Biol Evol. 2019 07 01; 36(7):1430-1441. Chen B, Shi Z, Chen Q, Shen X, Shibata D, Wen H, Wu CI. PMID: 30912799; PMCID: PMC7967884.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    24. Somatic cell evolution: how to improve with age. J Pathol. 2019 Jan; 247(1):3-5. Shibata D. PMID: 30246391; PMCID: PMC6428591.
      View in: PubMed   Mentions:    Fields:    Translation:Cells
    25. Epigenetic Heterogeneity in Human Colorectal Tumors Reveals Preferential Conservation And Evidence of Immune Surveillance. Sci Rep. 2018 11 23; 8(1):17292. Ryser MD, Yu M, Grady W, Siegmund K, Shibata D. PMID: 30470817; PMCID: PMC6251922.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansAnimalsCells
    26. Evolutionary Stem Cell Poker and Cancer Risks: The Paradox of The Large And Small Intestines. Curr Pathobiol Rep. 2018 Sep; 6(3):193-198. Shibata D. PMID: 30713810; PMCID: PMC6350825.
      View in: PubMed   Mentions: 2  
    27. Spatial mutation patterns as markers of early colorectal tumor cell mobility. Proc Natl Acad Sci U S A. 2018 05 29; 115(22):5774-5779. Ryser MD, Min BH, Siegmund KD, Shibata D. PMID: 29760052; PMCID: PMC5984490.
      View in: PubMed   Mentions: 30     Fields:    Translation:Humans
    28. Classifying the evolutionary and ecological features of neoplasms. Nat Rev Cancer. 2017 10; 17(10):605-619. Maley CC, Aktipis A, Graham TA, Sottoriva A, Boddy AM, Janiszewska M, Silva AS, Gerlinger M, Yuan Y, Pienta KJ, Anderson KS, Gatenby R, Swanton C, Posada D, Wu CI, Schiffman JD, Hwang ES, Polyak K, Anderson ARA, Brown JS, Greaves M, Shibata D. PMID: 28912577; PMCID: PMC5811185.
      View in: PubMed   Mentions: 189     Fields:    Translation:Humans
    29. Between-region genetic divergence reflects the mode and tempo of tumor evolution. Nat Genet. 2017 Jul; 49(7):1015-1024. Sun R, Hu Z, Sottoriva A, Graham TA, Harpak A, Ma Z, Fischer JM, Shibata D, Curtis C. PMID: 28581503; PMCID: PMC5643198.
      View in: PubMed   Mentions: 72     Fields:    Translation:HumansAnimalsCells
    30. Early mutation bursts in colorectal tumors. PLoS One. 2017; 12(3):e0172516. Zhao J, Salomon MP, Shibata D, Curtis C, Siegmund K, Marjoram P. PMID: 28257429; PMCID: PMC5336211.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    31. Management and outcomes following pancreaticoduodenectomy for ampullary adenocarcinoma. Am J Surg. 2017 Nov; 214(5):856-861. Chavez MT, Sharpe JP, O'Brien T, Patton KT, Portnoy DC, VanderWalde NA, Deneve JL, Shibata D, Behrman SW, Dickson PV. PMID: 28285709.
      View in: PubMed   Mentions: 6     Fields:    Translation:Humans
    32. Single cell lineage tracing reveals a role for TgfβR2 in intestinal stem cell dynamics and differentiation. Proc Natl Acad Sci U S A. 2016 10 25; 113(43):12192-12197. Fischer JM, Calabrese PP, Miller AJ, Muñoz NM, Grady WM, Shibata D, Liskay RM. PMID: 27791005; PMCID: PMC5087053.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansAnimalsCells
    33. At least two well-spaced samples are needed to genotype a solid tumor. BMC Cancer. 2016 Mar 25; 16:250. Siegmund K, Shibata D. PMID: 27015839; PMCID: PMC4807557.
      View in: PubMed   Mentions: 8     Fields:    Translation:Humans
    34. Synchronous rectal adenocarcinoma and splenic marginal zone lymphoma. Curr Oncol. 2016 Feb; 23(1):e70-4. Srikumar T, Markow M, Centeno B, Hoffe S, Tao J, Fernandez H, Strosberg J, Shibata D. PMID: 26966416; PMCID: PMC4754072.
      View in: PubMed   Mentions: 2     Fields:    
    35. HistoMosaic Detecting KRAS G12V Mutation Across Colorectal Cancer Tissue Slices through in Situ PCR. Anal Chem. 2016 Mar 01; 88(5):2792-8. Raub CB, Lee CC, Shibata D, Taylor C, Kartalov E. PMID: 26820161; PMCID: PMC7446286.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    36. Derivation of induced pluripotent stem cells from orangutan skin fibroblasts. BMC Res Notes. 2015 Oct 16; 8:577. Ramaswamy K, Yik WY, Wang XM, Oliphant EN, Lu W, Shibata D, Ryder OA, Hacia JG. PMID: 26475477; PMCID: PMC4609060.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansAnimalsCells
    37. Induced pluripotent stem cell models of Zellweger spectrum disorder show impaired peroxisome assembly and cell type-specific lipid abnormalities. Stem Cell Res Ther. 2015 Aug 29; 6:158. Wang XM, Yik WY, Zhang P, Lu W, Huang N, Kim BR, Shibata D, Zitting M, Chow RH, Moser AB, Steinberg SJ, Hacia JG. PMID: 26319495; PMCID: PMC4553005.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    38. Many private mutations originate from the first few divisions of a human colorectal adenoma. J Pathol. 2015 Nov; 237(3):355-62. Kang H, Salomon MP, Sottoriva A, Zhao J, Toy M, Press MF, Curtis C, Marjoram P, Siegmund K, Shibata D. PMID: 26119426; PMCID: PMC4607608.
      View in: PubMed   Mentions: 22     Fields:    Translation:HumansCells
    39. Can oncology recapitulate paleontology? Lessons from species extinctions. Nat Rev Clin Oncol. 2015 May; 12(5):273-85. Walther V, Hiley CT, Shibata D, Swanton C, Turner PE, Maley CC. PMID: 25687908; PMCID: PMC4569005.
      View in: PubMed   Mentions: 18     Fields:    Translation:Humans
    40. A Big Bang model of human colorectal tumor growth. Nat Genet. 2015 Mar; 47(3):209-16. Sottoriva A, Kang H, Ma Z, Graham TA, Salomon MP, Zhao J, Marjoram P, Siegmund K, Press MF, Shibata D, Curtis C. PMID: 25665006; PMCID: PMC4575589.
      View in: PubMed   Mentions: 525     Fields:    Translation:Humans
    41. Diffuse large B-cell lymphoma of germinal center and nongerminal center phenotypes presenting concurrently at the same anatomic site: intratumoral heterogeneity or composite lymphoma? Appl Immunohistochem Mol Morphol. 2015 Jan; 23(1):78-80. Siddiqi IN, Shibata D. PMID: 25153495.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    42. Ancestral inference in tumors: how much can we know? J Theor Biol. 2014 Oct 21; 359:136-45. Zhao J, Siegmund KD, Shibata D, Marjoram P. PMID: 24907673; PMCID: PMC4138290.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    43. Deep sequencing reveals lack of a clonal relationship between a metachronous classical hodgkin and diffuse large B-cell lymphoma. Clin Lymphoma Myeloma Leuk. 2014 Jun; 14(3):e87-93. Siddiqi IN, Ailawadhi S, Huang Q, Shibata RK, Kang H, Shibata D. PMID: 24548610.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    44. Direct measurements of human colon crypt stem cell niche genetic fidelity: the role of chance in non-darwinian mutation selection. Front Oncol. 2013 Oct 14; 3:264. Kang H, Shibata D. PMID: 24133655; PMCID: PMC3796283.
      View in: PubMed   Mentions: 14  
    45. Occult progression by Apc-deficient intestinal crypts as a target for chemoprevention. Carcinogenesis. 2014 Jan; 35(1):237-46. Fischer JM, Schepers AG, Clevers H, Shibata D, Liskay RM. PMID: 23996931; PMCID: PMC3871938.
      View in: PubMed   Mentions: 19     Fields:    Translation:AnimalsCells
    46. miR-675 mediates downregulation of Twist1 and Rb in AFP-secreting hepatocellular carcinoma. Ann Surg Oncol. 2013 Dec; 20 Suppl 3:S625-35. Hernandez JM, Elahi A, Clark CW, Wang J, Humphries LA, Centeno B, Bloom G, Fuchs BC, Yeatman T, Shibata D. PMID: 23864307.
      View in: PubMed   Mentions: 50     Fields:    Translation:HumansCells
    47. Variable clonal repopulation dynamics influence chemotherapy response in colorectal cancer. Science. 2013 Feb 01; 339(6119):543-8. Kreso A, O'Brien CA, van Galen P, Gan OI, Notta F, Brown AM, Ng K, Ma J, Wienholds E, Dunant C, Pollett A, Gallinger S, McPherson J, Mullighan CG, Shibata D, Dick JE. PMID: 23239622; PMCID: PMC9747244.
      View in: PubMed   Mentions: 369     Fields:    Translation:HumansAnimalsCells
    48. Single-molecule genomic data delineate patient-specific tumor profiles and cancer stem cell organization. Cancer Res. 2013 Jan 01; 73(1):41-9. Sottoriva A, Spiteri I, Shibata D, Curtis C, Tavaré S. PMID: 23090114; PMCID: PMC3544316.
      View in: PubMed   Mentions: 38     Fields:    Translation:HumansCells
    49. The gene expression profiles of induced pluripotent stem cells from individuals with childhood cerebral adrenoleukodystrophy are consistent with proposed mechanisms of pathogenesis. Stem Cell Res Ther. 2012 Oct 04; 3(5):39. Wang XM, Yik WY, Zhang P, Lu W, Dranchak PK, Shibata D, Steinberg SJ, Hacia JG. PMID: 23036268; PMCID: PMC3580430.
      View in: PubMed   Mentions: 16     Fields:    Translation:HumansCells
    50. Cancer. Heterogeneity and tumor history. Science. 2012 Apr 20; 336(6079):304-5. Shibata D. PMID: 22517848.
      View in: PubMed   Mentions: 45     Fields:    Translation:Humans
    51. Heterogeneity and randomness of DNA methylation patterns in human embryonic stem cells. DNA Cell Biol. 2012 Jun; 31(6):893-907. Tsai AG, Chen DM, Lin M, Hsieh JC, Okitsu CY, Taghva A, Shibata D, Hsieh CL. PMID: 22277069.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    52. The role of theorem proving in systems biology. J Theor Biol. 2012 May 07; 300:57-61. Wolkenhauer O, Shibata D, Mesarovic MD. PMID: 22244914.
      View in: PubMed   Mentions: 2     Fields:    Translation:Animals
    53. Epigenetic subgroups of esophageal and gastric adenocarcinoma with differential GATA5 DNA methylation associated with clinical and lifestyle factors. PLoS One. 2011; 6(10):e25985. Wang X, Kang GH, Campan M, Weisenberger DJ, Long TI, Cozen W, Bernstein L, Wu AH, Siegmund KD, Shibata D, Laird PW. PMID: 22028801; PMCID: PMC3197593.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    54. Different phenotypic consequences of simultaneous versus stepwise Apc loss. Oncogene. 2012 Apr 19; 31(16):2028-38. Fischer JM, Miller AJ, Shibata D, Liskay RM. PMID: 21892206; PMCID: PMC3235266.
      View in: PubMed   Mentions: 10     Fields:    Translation:AnimalsCells
    55. Molecular tumor clocks to study the evolution of drug resistance. Mol Pharm. 2011 Dec 05; 8(6):2050-4. Shibata D. PMID: 21732670; PMCID: PMC4142061.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
    56. High DNA methylation pattern intratumoral diversity implies weak selection in many human colorectal cancers. PLoS One. 2011; 6(6):e21657. Siegmund KD, Marjoram P, Tavaré S, Shibata D. PMID: 21738754; PMCID: PMC3125304.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansAnimalsCells
    57. Reduction of pancreatic acinar cell tumor multiplicity in Dnmt1 hypomorphic mice. Carcinogenesis. 2011 Jun; 32(6):829-35. Oghamian S, Sodir NM, Bashir MU, Shen H, Cullins AE, Carroll CA, Kundu P, Shibata D, Laird PW. PMID: 21362628; PMCID: PMC3106433.
      View in: PubMed   Mentions: 11     Fields:    Translation:AnimalsCells
    58. A stem cell niche dominance theorem. BMC Syst Biol. 2011 Jan 08; 5:4. Wolkenhauer O, Shibata DK, Mesarovic MD. PMID: 21214945; PMCID: PMC3030540.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    59. Mutation and epigenetic molecular clocks in cancer. Carcinogenesis. 2011 Feb; 32(2):123-8. Shibata D. PMID: 21076057; PMCID: PMC3026845.
      View in: PubMed   Mentions: 23     Fields:    Translation:Humans
    60. A stem cell niche dominance theorem. J Stem Cells Regen Med. 2010; 6(2):98. Wolkenhauer O, Shibata D, Mesarovic MD. PMID: 24693115.
      View in: PubMed   Mentions:
    61. Using DNA methylation patterns to infer tumor ancestry. PLoS One. 2010 Aug 09; 5(8):e12002. Hong YJ, Marjoram P, Shibata D, Siegmund KD. PMID: 20711251; PMCID: PMC2918495.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansCells
    62. Is there any genetic instability in human cancer? DNA Repair (Amst). 2010 Aug 05; 9(8):858; discussion 859-60. Shibata D, Lieber MR. PMID: 20605538; PMCID: PMC2914198.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansCells
    63. Identification and functional relevance of de novo DNA methylation in cancerous B-cell populations. J Cell Biochem. 2010 Mar 01; 109(4):818-27. Wang XM, Greiner TC, Bibikova M, Pike BL, Siegmund KD, Sinha UK, Müschen M, Jaeger EB, Weisenburger DD, Chan WC, Shibata D, Fan JB, Hacia JG. PMID: 20069569; PMCID: PMC3122883.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    64. Hormone therapy, DNA methylation and colon cancer. Carcinogenesis. 2010 Jun; 31(6):1060-7. Wu AH, Siegmund KD, Long TI, Cozen W, Wan P, Tseng CC, Shibata D, Laird PW. PMID: 20064828; PMCID: PMC2878358.
      View in: PubMed   Mentions: 16     Fields:    Translation:HumansCells
    65. A simple algebraic cancer equation: calculating how cancers may arise with normal mutation rates. BMC Cancer. 2010 Jan 05; 10:3. Calabrese P, Shibata D. PMID: 20051132; PMCID: PMC2829925.
      View in: PubMed   Mentions: 31     Fields:    Translation:HumansCells
    66. Systems biologists seek fuller integration of systems biology approaches in new cancer research programs. Cancer Res. 2010 Jan 01; 70(1):12-3. Wolkenhauer O, Auffray C, Baltrusch S, Blüthgen N, Byrne H, Cascante M, Ciliberto A, Dale T, Drasdo D, Fell D, Ferrell JE, Gallahan D, Gatenby R, Günther U, Harms BD, Herzel H, Junghanss C, Kunz M, van Leeuwen I, Lenormand P, Levi F, Linnebacher M, Lowengrub J, Maini PK, Malik A, Rateitschak K, Sansom O, Schäfer R, Schürrle K, Sers C, Schnell S, Shibata D, Tyson J, Vera J, White M, Zhivotovsky B, Jaster R. PMID: 20028868; PMCID: PMC2802734.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansAnimals
    67. Many colorectal cancers are "flat" clonal expansions. Cell Cycle. 2009 Jul 15; 8(14):2187-93. Siegmund KD, Marjoram P, Tavaré S, Shibata D. PMID: 19556889; PMCID: PMC4145878.
      View in: PubMed   Mentions: 17     Fields:    Translation:HumansCells
    68. Inferring clonal expansion and cancer stem cell dynamics from DNA methylation patterns in colorectal cancers. Proc Natl Acad Sci U S A. 2009 Mar 24; 106(12):4828-33. Siegmund KD, Marjoram P, Woo YJ, Tavaré S, Shibata D. PMID: 19261858; PMCID: PMC2651202.
      View in: PubMed   Mentions: 81     Fields:    Translation:HumansCells
    69. Older individuals appear to acquire mitotically older colorectal cancers. J Pathol. 2009 Mar; 217(4):483-8. Woo YJ, Siegmund KD, Tavaré S, Shibata D. PMID: 19165870; PMCID: PMC4418435.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansCells
    70. Urinary tract infections and reduced risk of bladder cancer in Los Angeles. Br J Cancer. 2009 Mar 10; 100(5):834-9. Jiang X, Castelao JE, Groshen S, Cortessis VK, Shibata D, Conti DV, Yuan JM, Pike MC, Gago-Dominguez M. PMID: 19174821; PMCID: PMC2653778.
      View in: PubMed   Mentions: 25     Fields:    Translation:HumansCells
    71. Inferring human stem cell behaviour from epigenetic drift. J Pathol. 2009 Jan; 217(2):199-205. Shibata D. PMID: 19031430; PMCID: PMC4156515.
      View in: PubMed   Mentions: 20     Fields:    Translation:HumansCells
    72. Water intake and bladder cancer risk in Los Angeles County. Int J Cancer. 2008 Oct 01; 123(7):1649-56. Jiang X, Castelao JE, Groshen S, Cortessis VK, Shibata DK, Conti DV, Gago-Dominguez M. PMID: 18623082.
      View in: PubMed   Mentions: 24     Fields:    Translation:Humans
    73. Modeling DNA methylation in a population of cancer cells. Stat Appl Genet Mol Biol. 2008; 7(1):Article 18. Siegmund KD, Marjoram P, Shibata D. PMID: 18597664.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansAnimalsCells
    74. Multilineage hematopoietic recovery with concomitant antitumor effects using low dose Interleukin-12 in myelosuppressed tumor-bearing mice. J Transl Med. 2008 May 19; 6:26. Basile LA, Gallaher TK, Shibata D, Miller JD, Douer D. PMID: 18489769; PMCID: PMC2424034.
      View in: PubMed   Mentions: 10     Fields:    Translation:AnimalsCells
    75. Inferring relative numbers of human leucocyte genome replications. Br J Haematol. 2008 Jun; 141(6):862-71. Chu M, Siegmund KD, Hao QL, Crooks GM, Tavaré S, Shibata D. PMID: 18410448.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansCells
    76. Unregulated smooth-muscle myosin in human intestinal neoplasia. Proc Natl Acad Sci U S A. 2008 Apr 08; 105(14):5513-8. Alhopuro P, Phichith D, Tuupanen S, Sammalkorpi H, Nybondas M, Saharinen J, Robinson JP, Yang Z, Chen LQ, Orntoft T, Mecklin JP, Järvinen H, Eng C, Moeslein G, Shibata D, Houlston RS, Lucassen A, Tomlinson IP, Launonen V, Ristimäki A, Arango D, Karhu A, Sweeney HL, Aaltonen LA. PMID: 18391202; PMCID: PMC2291082.
      View in: PubMed   Mentions: 36     Fields:    Translation:HumansCells
    77. Tractable Cre-lox system for stochastic alteration of genes in mice. Nat Methods. 2008 Mar; 5(3):227-9. Miller AJ, Dudley SD, Tsao JL, Shibata D, Liskay RM. PMID: 18264106; PMCID: PMC2394730.
      View in: PubMed   Mentions: 15     Fields:    Translation:AnimalsCells
    78. Mistakes make history: visualizing intestinal tectonics. Gastroenterology. 2008 Feb; 134(2):628-31. Shibata D. PMID: 18242228.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    79. Stem cells as common ancestors in a colorectal cancer ancestral tree. Curr Opin Gastroenterol. 2008 Jan; 24(1):59-63. Shibata D. PMID: 18043234.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    80. Ancestral trees for modeling stem cell lineages genetically rather than functionally: understanding mutation accumulation and distinguishing the restrictive cancer stem cell propagation theory and the unrestricted cell propagation theory of human tumorigenesis. Breast Dis. 2008; 29:15-25. Shibata DK, Kern SE. PMID: 19029621.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    81. The fuzzy math of solid tumor stem cells: a perspective. Cancer Res. 2007 Oct 01; 67(19):8985-8. Kern SE, Shibata D. PMID: 17908998.
      View in: PubMed   Mentions: 33     Fields:    Translation:HumansCells
    82. Lack of increases in methylation at three CpG-rich genomic loci in non-mitotic adult tissues during aging. BMC Med Genet. 2007 Jul 31; 8:50. Chu MW, Siegmund KD, Eckstam CL, Kim JY, Yang AS, Kanel GC, Tavaré S, Shibata D. PMID: 17672908; PMCID: PMC1950491.
      View in: PubMed   Mentions: 16     Fields:    Translation:HumansCells
    83. IL-12 facilitates both the recovery of endogenous hematopoiesis and the engraftment of stem cells after ionizing radiation. Exp Hematol. 2007 Feb; 35(2):203-13. Chen T, Burke KA, Zhan Y, Wang X, Shibata D, Zhao Y. PMID: 17258069.
      View in: PubMed   Mentions: 32     Fields:    Translation:AnimalsCells
    84. The stem cell population of the human colon crypt: analysis via methylation patterns. PLoS Comput Biol. 2007 Mar 02; 3(3):e28. Nicolas P, Kim KM, Shibata D, Tavaré S. PMID: 17335343; PMCID: PMC1808490.
      View in: PubMed   Mentions: 48     Fields:    Translation:HumansCells
    85. Stem cell chronicles: autobiographies within genomes. Stem Cell Rev. 2007 Jan; 3(1):94-103. Shibata D, Tavaré S. PMID: 17873386.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansCells
    86. Cytoreductive surgery and hyperthermic intraperitoneal chemotherapy in the management of peritoneal surface malignancies of colonic origin: a consensus statement. Society of Surgical Oncology. Ann Surg Oncol. 2007 Jan; 14(1):128-33. Esquivel J, Sticca R, Sugarbaker P, Levine E, Yan TD, Alexander R, Baratti D, Bartlett D, Barone R, Barrios P, Bieligk S, Bretcha-Boix P, Chang CK, Chu F, Chu Q, Daniel S, de Bree E, Deraco M, Dominguez-Parra L, Elias D, Flynn R, Foster J, Garofalo A, Gilly FN, Glehen O, Gomez-Portilla A, Gonzalez-Bayon L, Gonzalez-Moreno S, Goodman M, Gushchin V, Hanna N, Hartmann J, Harrison L, Hoefer R, Kane J, Kecmanovic D, Kelley S, Kuhn J, Lamont J, Lange J, Li B, Loggie B, Mahteme H, Mann G, Martin R, Misih RA, Moran B, Morris D, Onate-Ocana L, Petrelli N, Philippe G, Pingpank J, Pitroff A, Piso P, Quinones M, Riley L, Rutstein L, Saha S, Alrawi S, Sardi A, Schneebaum S, Shen P, Shibata D, Spellman J, Stojadinovic A, Stewart J, Torres-Melero J, Tuttle T, Verwaal V, Villar J, Wilkinson N, Younan R, Zeh H, Zoetmulder F, Sebbag G, Society of Surgical Oncology Annual Meeting. PMID: 17072675.
      View in: PubMed   Mentions: 125     Fields:    Translation:Humans
    87. Smad3 deficiency promotes tumorigenesis in the distal colon of ApcMin/+ mice. Cancer Res. 2006 Sep 01; 66(17):8430-8. Sodir NM, Chen X, Park R, Nickel AE, Conti PS, Moats R, Bading JR, Shibata D, Laird PW. PMID: 16951153.
      View in: PubMed   Mentions: 52     Fields:    Translation:HumansAnimalsCells
    88. Clonal diversity in tumor progression. Nat Genet. 2006 Apr; 38(4):402-3. Shibata D. PMID: 16570060.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    89. Counting divisions in a human somatic cell tree: how, what and why? Cell Cycle. 2006 Mar; 5(6):610-4. Shibata D, Tavaré S. PMID: 16582617.
      View in: PubMed   Mentions: 28     Fields:    Translation:HumansCells
    90. Human hair genealogies and stem cell latency. BMC Biol. 2006 Feb 03; 4:2. Kim JY, Tavaré S, Shibata D. PMID: 16457718; PMCID: PMC1386708.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansCells
    91. When does MMR loss occur during HNPCC progression? Cancer Biomark. 2006; 2(1-2):29-35. Shibata D. PMID: 17192057.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansCells
    92. Counting human somatic cell replications: methylation mirrors endometrial stem cell divisions. Proc Natl Acad Sci U S A. 2005 Dec 06; 102(49):17739-44. Kim JY, Tavaré S, Shibata D. PMID: 16314580; PMCID: PMC1308885.
      View in: PubMed   Mentions: 47     Fields:    Translation:HumansCells
    93. Numbers of mutations to different types of colorectal cancer. BMC Cancer. 2005 Oct 03; 5:126. Calabrese P, Mecklin JP, Järvinen HJ, Aaltonen LA, Tavaré S, Shibata D. PMID: 16202134; PMCID: PMC1266026.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    94. Diethylstilbestrol effects and lymphomagenesis in Mlh1-deficient mice. Int J Cancer. 2005 Jul 01; 115(4):666-9. Kabbarah O, Sotelo AK, Mallon MA, Winkeler EL, Fan MY, Pfeifer JD, Shibata D, Gutmann DH, Goodfellow PJ. PMID: 15700306.
      View in: PubMed   Mentions: 4     Fields:    Translation:AnimalsCells
    95. Age-related human small intestine methylation: evidence for stem cell niches. BMC Med. 2005 Jun 23; 3:10. Kim JY, Siegmund KD, Tavaré S, Shibata D. PMID: 15975143; PMCID: PMC1168897.
      View in: PubMed   Mentions: 30     Fields:    Translation:HumansCells
    96. Stability of colon stem cell methylation after neo-adjuvant therapy in a patient with attenuated familial adenomatous polyposis. BMC Gastroenterol. 2005 Jun 07; 5:19. Kim JY, Beart RW, Shibata D. PMID: 15941485; PMCID: PMC1164411.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansCells
    97. Generation and characterization of endonuclease G null mice. Mol Cell Biol. 2005 Jan; 25(1):294-302. Irvine RA, Adachi N, Shibata DK, Cassell GD, Yu K, Karanjawala ZE, Hsieh CL, Lieber MR. PMID: 15601850; PMCID: PMC538798.
      View in: PubMed   Mentions: 43     Fields:    Translation:AnimalsCells
    98. Deficiencies in mouse Myh and Ogg1 result in tumor predisposition and G to T mutations in codon 12 of the K-ras oncogene in lung tumors. Cancer Res. 2004 May 01; 64(9):3096-102. Xie Y, Yang H, Cunanan C, Okamoto K, Shibata D, Pan J, Barnes DE, Lindahl T, McIlhatton M, Fishel R, Miller JH. PMID: 15126346.
      View in: PubMed   Mentions: 102     Fields:    Translation:HumansAnimalsCells
    99. Tracing ancestry with methylation patterns: most crypts appear distantly related in normal adult human colon. BMC Gastroenterol. 2004 Apr 01; 4:8. Kim KM, Shibata D. PMID: 15059289; PMCID: PMC400737.
      View in: PubMed   Mentions: 17     Fields:    Translation:HumansCells
    100. Enhanced stem cell survival in familial adenomatous polyposis. Am J Pathol. 2004 Apr; 164(4):1369-77. Kim KM, Calabrese P, Tavaré S, Shibata D. PMID: 15039224; PMCID: PMC1615334.
      View in: PubMed   Mentions: 30     Fields:    Translation:HumansCells
    101. Pretumor progression: clonal evolution of human stem cell populations. Am J Pathol. 2004 Apr; 164(4):1337-46. Calabrese P, Tavaré S, Shibata D. PMID: 15039221; PMCID: PMC1615336.
      View in: PubMed   Mentions: 46     Fields:    Translation:HumansCells
    102. Colorectal pretumor progression before and after loss of DNA mismatch repair. Am J Pathol. 2004 Apr; 164(4):1447-53. Calabrese P, Tsao JL, Yatabe Y, Salovaara R, Mecklin JP, Järvinen HJ, Aaltonen LA, Tavaré S, Shibata D. PMID: 15039232; PMCID: PMC1615342.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansCells
    103. In vitro mutation artifacts after formalin fixation and error prone translesion synthesis during PCR. BMC Clin Pathol. 2004 Feb 12; 4(1):1. Quach N, Goodman MF, Shibata D. PMID: 15028125; PMCID: PMC368439.
      View in: PubMed   Mentions: 60  
    104. The embryonic lethality in DNA ligase IV-deficient mice is rescued by deletion of Ku: implications for unifying the heterogeneous phenotypes of NHEJ mutants. DNA Repair (Amst). 2002 Dec 05; 1(12):1017-26. Karanjawala ZE, Adachi N, Irvine RA, Oh EK, Shibata D, Schwarz K, Hsieh CL, Lieber MR. PMID: 12531011.
      View in: PubMed   Mentions: 50     Fields:    Translation:HumansAnimalsCells
    105. Molecular tumour clocks and colorectal cancer: seeing the unseen. Pathology. 2002 Dec; 34(6):534-40. Shibata D. PMID: 12555991.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimalsCells
    106. Diet, cancer and aging in DNA mismatch repair deficient mice. Carcinogenesis. 2002 Nov; 23(11):1807-10. Tsao JL, Dudley S, Kwok B, Nickel AE, Laird PW, Siegmund KD, Liskay RM, Shibata D. PMID: 12419828.
      View in: PubMed   Mentions: 13     Fields:    Translation:AnimalsCells
    107. Methylation reveals a niche: stem cell succession in human colon crypts. Oncogene. 2002 Aug 12; 21(35):5441-9. Kim KM, Shibata D. PMID: 12154406.
      View in: PubMed   Mentions: 47     Fields:    Translation:HumansCells
    108. DNA methyltransferase deficiency modifies cancer susceptibility in mice lacking DNA mismatch repair. Mol Cell Biol. 2002 May; 22(9):2906-17. Trinh BN, Long TI, Nickel AE, Shibata D, Laird PW. PMID: 11940649; PMCID: PMC133764.
      View in: PubMed   Mentions: 29     Fields:    Translation:AnimalsCells
    109. PolyA deletions in hereditary nonpolyposis colorectal cancer: mutations before a gatekeeper. Am J Pathol. 2002 Apr; 160(4):1503-6. Kim KM, Salovaara R, Mecklin JP, Järvinen HJ, Aaltonen LA, Shibata D. PMID: 11943734; PMCID: PMC1867223.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansPHPublic Health
    110. Low-level microsatellite instability in most colorectal carcinomas. Cancer Res. 2002 Feb 15; 62(4):1166-70. Laiho P, Launonen V, Lahermo P, Esteller M, Guo M, Herman JG, Mecklin JP, Järvinen H, Sistonen P, Kim KM, Shibata D, Houlston RS, Aaltonen LA. PMID: 11861399.
      View in: PubMed   Mentions: 69     Fields:    Translation:HumansCells
    111. Global gene expression profiling in Barrett's esophagus and esophageal cancer: a comparative analysis using cDNA microarrays. Oncogene. 2002 Jan 17; 21(3):475-8. Selaru FM, Zou T, Xu Y, Shustova V, Yin J, Mori Y, Sato F, Wang S, Olaru A, Shibata D, Greenwald BD, Krasna MJ, Abraham JM, Meltzer SJ. PMID: 11821959.
      View in: PubMed   Mentions: 37     Fields:    Translation:Humans
    112. Is there a role for incomplete resection in the management of retroperitoneal liposarcomas? J Am Coll Surg. 2001 Oct; 193(4):373-9. Shibata D, Lewis JJ, Leung DH, Brennan MF. PMID: 11584964.
      View in: PubMed   Mentions: 32     Fields:    Translation:Humans
    113. Dietary heterocyclic amines and microsatellite instability in colon adenocarcinomas. Carcinogenesis. 2001 Oct; 22(10):1681-4. Wu AH, Shibata D, Yu MC, Lai MY, Ross RK. PMID: 11577009.
      View in: PubMed   Mentions: 19     Fields:    Translation:HumansCells
    114. Investigating stem cells in human colon by using methylation patterns. Proc Natl Acad Sci U S A. 2001 Sep 11; 98(19):10839-44. Yatabe Y, Tavaré S, Shibata D. PMID: 11517339; PMCID: PMC58561.
      View in: PubMed   Mentions: 143     Fields:    Translation:HumansCells
    115. Global and gene-specific epigenetic patterns in human bladder cancer genomes are relatively stable in vivo and in vitro over time. Cancer Res. 2001 Aug 01; 61(15):5875-84. Markl ID, Cheng J, Liang G, Shibata D, Laird PW, Jones PA. PMID: 11479229.
      View in: PubMed   Mentions: 20     Fields:    Translation:HumansCells
    116. Mismatch repair deficiency and CpG island hypermethylation in sporadic colon adenocarcinomas. Cancer Epidemiol Biomarkers Prev. 2001 Jul; 10(7):799-803. Xiong Z, Wu AH, Bender CM, Tsao JL, Blake C, Shibata D, Jones PA, Yu MC, Ross RK, Laird PW. PMID: 11440966.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansCells
    117. Extensive somatic microsatellite mutations in normal human tissue. Cancer Res. 2001 Jun 01; 61(11):4541-4. Vilkki S, Tsao JL, Loukola A, Pöyhönen M, Vierimaa O, Herva R, Aaltonen LA, Shibata D. PMID: 11389087.
      View in: PubMed   Mentions: 31     Fields:    Translation:HumansCells
    118. Stepwise deletions of polyA sequences in mismatch repair-deficient colorectal cancers. Am J Pathol. 2001 May; 158(5):1867-70. Blake C, Tsao JL, Wu A, Shibata D. PMID: 11337385; PMCID: PMC1891934.
      View in: PubMed   Mentions: 17     Fields:    Translation:HumansAnimalsCells
    119. Talking tumours: histories from sequences. Ann Med. 2001 Mar; 33(2):148-52. Shibata D. PMID: 11327118.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    120. The SURF Technique : Selective Genetic Analysis of Microscopic Tissue Heterogeneity. Methods Mol Med. 2001; 50:59-67. Shibata D. PMID: 21318816.
      View in: PubMed   Mentions:    Fields:    
    121. Genetic predisposition and somatic diversification in tumor development and progression. Adv Cancer Res. 2001; 80:83-114. Shibata D, Aaltonen LA. PMID: 11034541.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansAnimalsCells
    122. Bladder cancer genotype stability during clinical progression. Genes Chromosomes Cancer. 2000 Sep; 29(1):26-32. Tsao JL, Yatabe Y, Markl ID, Hajyan K, Jones PA, Shibata D. PMID: 10918390.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    123. MethyLight: a high-throughput assay to measure DNA methylation. Nucleic Acids Res. 2000 Apr 15; 28(8):E32. Eads CA, Danenberg KD, Kawakami K, Saltz LB, Blake C, Shibata D, Danenberg PV, Laird PW. PMID: 10734209; PMCID: PMC102836.
      View in: PubMed   Mentions: 520     Fields:    Translation:HumansCells
    124. Heterozygous DNA mismatch repair gene PMS2-knockout mice are susceptible to intestinal tumor induction with N-methyl-N-nitrosourea. Carcinogenesis. 2000 Apr; 21(4):833-8. Qin X, Shibata D, Gerson SL. PMID: 10753224.
      View in: PubMed   Mentions: 4     Fields:    Translation:AnimalsCells
    125. Characteristics and pitfalls of contrast-enhanced, T1-weighted magnetization transfer images of the brain. Acad Radiol. 2000 Mar; 7(3):156-64. Higano S, Shrier DA, Numaguchi Y, Shibata DK, Kwok E. PMID: 10730810.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    126. Clinical significance of p53 mutations in adenocarcinoma of the esophagus and cardia. Ann Surg. 2000 Feb; 231(2):179-87. Ireland AP, Shibata DK, Chandrasoma P, Lord RV, Peters JH, DeMeester TR. PMID: 10674608; PMCID: PMC1420984.
      View in: PubMed   Mentions: 21     Fields:    Translation:Humans
    127. Genetic reconstruction of individual colorectal tumor histories. Proc Natl Acad Sci U S A. 2000 Feb 01; 97(3):1236-41. Tsao JL, Yatabe Y, Salovaara R, Järvinen HJ, Mecklin JP, Aaltonen LA, Tavaré S, Shibata D. PMID: 10655514; PMCID: PMC15581.
      View in: PubMed   Mentions: 60     Fields:    Translation:HumansCells
    128. Transjugular intrahepatic portosystemic shunt for treatment of bleeding ectopic varices with portal hypertension. Dis Colon Rectum. 1999 Dec; 42(12):1581-5. Shibata D, Brophy DP, Gordon FD, Anastopoulos HT, Sentovich SM, Bleday R. PMID: 10613477.
      View in: PubMed   Mentions: 34     Fields:    Translation:Humans
    129. Epstein-Barr virus (EBV) nuclear antigen (EBNA)-4 mutation in EBV-associated malignancies in three different populations. Am J Pathol. 1999 Sep; 155(3):941-7. Chu PG, Chang KL, Chen WG, Chen YY, Shibata D, Hayashi K, Bacchi C, Bacchi M, Weiss LM. PMID: 10487851; PMCID: PMC1866909.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansCells
    130. Colorectal adenoma and cancer divergence. Evidence of multilineage progression. Am J Pathol. 1999 Jun; 154(6):1815-24. Tsao JL, Tavaré S, Salovaara R, Jass JR, Aaltonen LA, Shibata D. PMID: 10362806; PMCID: PMC2222548.
      View in: PubMed   Mentions: 23     Fields:    Translation:HumansCells
    131. Complementation of plant mutants with large genomic DNA fragments by a transformation-competent artificial chromosome vector accelerates positional cloning. Proc Natl Acad Sci U S A. 1999 May 25; 96(11):6535-40. Liu YG, Shirano Y, Fukaki H, Yanai Y, Tasaka M, Tabata S, Shibata D. PMID: 10339623; PMCID: PMC26917.
      View in: PubMed   Mentions: 81     Fields:    Translation:AnimalsCells
    132. Loss of function of Trp53, but not Apc, leads to the development of esophageal adenocarcinoma in mice with jejunoesophageal reflux. J Surg Res. 1999 May 01; 83(1):48-55. Fein M, Peters JH, Baril N, McGarvey M, Chandrasoma P, Shibata D, Laird PW, Skinner KA. PMID: 10210642.
      View in: PubMed   Mentions: 10     Fields:    Translation:Animals
    133. FILAMENTOUS FLOWER, a meristem and organ identity gene of Arabidopsis, encodes a protein with a zinc finger and HMG-related domains. Genes Dev. 1999 May 01; 13(9):1079-88. Sawa S, Watanabe K, Goto K, Liu YG, Shibata D, Kanaya E, Morita EH, Okada K. PMID: 10323860; PMCID: PMC316944.
      View in: PubMed   Mentions: 181     Fields:    Translation:AnimalsCells
    134. Pattern recognition and arrays: the times are a-changing. Am J Pathol. 1999 Apr; 154(4):979-80. Shibata D. PMID: 10233834; PMCID: PMC1866566.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    135. Tracing cell fates in human colorectal tumors from somatic microsatellite mutations: evidence of adenomas with stem cell architecture. Am J Pathol. 1998 Oct; 153(4):1189-200. Tsao JL, Zhang J, Salovaara R, Li ZH, Järvinen HJ, Mecklin JP, Aaltonen LA, Shibata D. PMID: 9777950; PMCID: PMC1853055.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansAnimalsCells
    136. Epstein-Barr virus-associated nuclear antigen-1 carboxy-terminal gene sequences in Japanese and American patients with gastric carcinoma. Lab Invest. 1998 Jul; 78(7):877-82. Chen YY, Chang KL, Chen WG, Shibata D, Hayashi K, Weiss LM. PMID: 9690565.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansCells
    137. Overexpression of pp60c-src elicits invasive behavior in rat colon epithelial cells. Gastroenterology. 1998 Jun; 114(6):1287-95. Pories SE, Hess DT, Swenson K, Lotz M, Moussa R, Steele G, Shibata D, Rieger-Christ KM, Summerhayes C. PMID: 9609766.
      View in: PubMed   Mentions: 5     Fields:    Translation:AnimalsCells
    138. Enhanced intestinal adenomatous polyp formation in Pms2-/-;Min mice. Cancer Res. 1998 Mar 15; 58(6):1087-9. Baker SM, Harris AC, Tsao JL, Flath TJ, Bronner CE, Gordon M, Shibata D, Liskay RM. PMID: 9515784.
      View in: PubMed   Mentions: 14     Fields:    Translation:AnimalsCells
    139. Tumour susceptibility and spontaneous mutation in mice deficient in Mlh1, Pms1 and Pms2 DNA mismatch repair. Nat Genet. 1998 Mar; 18(3):276-9. Prolla TA, Baker SM, Harris AC, Tsao JL, Yao X, Bronner CE, Zheng B, Gordon M, Reneker J, Arnheim N, Shibata D, Bradley A, Liskay RM. PMID: 9500552.
      View in: PubMed   Mentions: 116     Fields:    Translation:AnimalsCells
    140. The SURF technique. Selective genetic analysis of microscopic tissue heterogeneity. Methods Mol Biol. 1998; 92:39-47. Shibata D. PMID: 9664501.
      View in: PubMed   Mentions: 2     Fields:    
    141. The dynamics of early intestinal tumour proliferation: to be or not to be. Cancer Surv. 1998; 32:181-200. Shibata D. PMID: 10489628.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimalsCells
    142. Molecular tumor clocks and dynamic phenotype. Am J Pathol. 1997 Sep; 151(3):643-6. Shibata D. PMID: 9284810; PMCID: PMC1857841.
      View in: PubMed   Mentions: 4     Fields:    Translation:HumansCells
    143. Intestinal stem cell division and genetic diversity. A computer and experimental analysis. Am J Pathol. 1997 Aug; 151(2):573-9. Tsao JL, Davis SD, Baker SM, Liskay RM, Shibata D. PMID: 9250170; PMCID: PMC1857988.
      View in: PubMed   Mentions: 4     Fields:    Translation:AnimalsCells
    144. DNA mismatch repair in mammals: role in disease and meiosis. Curr Opin Genet Dev. 1997 Jun; 7(3):364-70. Arnheim N, Shibata D. PMID: 9229112.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansAnimalsCells
    145. Telomerase activity in normal and neoplastic breast. Clin Cancer Res. 1997 Apr; 3(4):627-31. Tsao Jl, Zhao Y, Lukas J, Yang X, Shah A, Press M, Shibata D. PMID: 9815730.
      View in: PubMed   Mentions: 11     Fields:    Translation:Humans
    146. Microsatellite instability is rare in B-cell non-Hodgkin's lymphomas. Blood. 1997 Feb 01; 89(3):975-9. Gamberi B, Gaidano G, Parsa N, Carbone A, Roncella S, Knowles DM, Louie DC, Shibata D, Chaganti RS, Dalla-Favera R. PMID: 9028329.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    147. Molecular tumour clocks. Ann Med. 1997 Feb; 29(1):5-7. Shibata D. PMID: 9073319.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    148. Localization of a susceptibility locus for Peutz-Jeghers syndrome to 19p using comparative genomic hybridization and targeted linkage analysis. Nat Genet. 1997 Jan; 15(1):87-90. Hemminki A, Tomlinson I, Markie D, Järvinen H, Sistonen P, Björkqvist AM, Knuutila S, Salovaara R, Bodmer W, Shibata D, de la Chapelle A, Aaltonen LA. PMID: 8988175.
      View in: PubMed   Mentions: 125     Fields:    Translation:HumansCells
    149. The DCC protein and prognosis in colorectal cancer. N Engl J Med. 1996 Dec 05; 335(23):1727-32. Shibata D, Reale MA, Lavin P, Silverman M, Fearon ER, Steele G, Jessup JM, Loda M, Summerhayes IC. PMID: 8929264.
      View in: PubMed   Mentions: 65     Fields:    Translation:Humans
    150. Loss of DNA mismatch repair: life in the fast lane? Gastroenterology. 1996 Aug; 111(2):519-21. Shibata D. PMID: 8690218.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    151. Epstein-Barr virus and gastric carcinoma. Jpn J Cancer Res. 1996 Aug; 87(8):Inside front cover. Shibata DK. PMID: 8797882.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    152. Somatic microsatellite mutations as molecular tumor clocks. Nat Med. 1996 Jun; 2(6):676-81. Shibata D, Navidi W, Salovaara R, Li ZH, Aaltonen LA. PMID: 8640559.
      View in: PubMed   Mentions: 31     Fields:    Translation:HumansAnimalsCells
    153. Effects of mutation and growth rates on patterns of microsatellite instability. Am J Pathol. 1996 Jun; 148(6):1757-61. Li ZH, Aaltonen LA, Shu Q, Srivastava S, Grizzle WE, Shibata D. PMID: 8669462; PMCID: PMC1861626.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansAnimalsCells
    154. Human papillomavirus investigation of patients with cervical intraepithelial neoplasia 3, some of whom progressed to invasive cancer. Int J Gynecol Pathol. 1996 Apr; 15(2):127-30. Shah KV, Kessis TD, Shah F, Gupta JW, Shibata D, Jones RW. PMID: 8786201.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    155. Telomerase activity is commonly detected in hereditary nonpolyposis colorectal cancers. Am J Pathol. 1996 Apr; 148(4):1075-9. Li ZH, Salovaara R, Aaltonen LA, Shibata D. PMID: 8644849; PMCID: PMC1861533.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansCells
    156. High-dose chemotherapy and autologous bone marrow plus peripheral blood stem cell transplantation for patients with lymphoma or metastatic breast cancer: use of marker genes to investigate hematopoietic reconstitution in adults. Hum Gene Ther. 1996 Mar 20; 7(5):669-84. Douer D, Levine A, Anderson WF, Gordon M, Groshen S, Khan A, Mohrbacher A, Muggia F, Shibata D. PMID: 8845392.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCTClinical Trials
    157. Role of zidovudine antiretroviral therapy in the pathogenesis of acquired immunodeficiency syndrome-related lymphoma. Blood. 1995 Dec 15; 86(12):4612-6. Levine AM, Bernstein L, Sullivan-Halley J, Shibata D, Mahterian SB, Nathwani BN. PMID: 8541552.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    158. Somatic mitochondrial mutation in gastric cancer. Am J Pathol. 1995 Oct; 147(4):1105-11. Burgart LJ, Zheng J, Shu Q, Strickler JG, Shibata D. PMID: 7573355; PMCID: PMC1871018.
      View in: PubMed   Mentions: 21     Fields:    Translation:HumansCells
    159. Heterogeneity in intratumor distribution of p53 mutations in human prostate cancer. Am J Pathol. 1995 Jul; 147(1):92-101. Mirchandani D, Zheng J, Miller GJ, Ghosh AK, Shibata DK, Cote RJ, Roy-Burman P. PMID: 7604888; PMCID: PMC1869872.
      View in: PubMed   Mentions: 18     Fields:    Translation:HumansCells
    160. Nodal benign and malignant monocytoid B cells with and without follicular lymphomas: a comparative study of follicular colonization, light chain restriction, bcl-2, and t(14;18) in 39 cases. Hum Pathol. 1995 Jun; 26(6):625-32. Hernandez AM, Nathwani BN, Nguyen D, Shibata D, Chuan W, Nichols P, Taylor CR. PMID: 7774892.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    161. Elevated antibody titers to Epstein-Barr virus prior to the diagnosis of Epstein-Barr-virus-associated gastric adenocarcinoma. Int J Cancer. 1995 Mar 03; 60(5):642-4. Levine PH, Stemmermann G, Lennette ET, Hildesheim A, Shibata D, Nomura A. PMID: 7860138.
      View in: PubMed   Mentions: 43     Fields:    Translation:HumansCells
    162. Concordance for Hodgkin's disease in identical twins suggesting genetic susceptibility to the young-adult form of the disease. N Engl J Med. 1995 Feb 16; 332(7):413-8. Mack TM, Cozen W, Shibata DK, Weiss LM, Nathwani BN, Hernandez AM, Taylor CR, Hamilton AS, Deapen DM, Rappaport EB. PMID: 7824015.
      View in: PubMed   Mentions: 54     Fields:    Translation:HumansCells
    163. Epstein-Barr virus-associated non-Hodgkin's lymphoma in HIV-infected patients. Leuk Lymphoma. 1995 Jan; 16(3-4):217-21. Hernandez AM, Shibata D. PMID: 7719229.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    164. Patterns of p53 mutations in squamous cell carcinoma of the lung. Acquisition at a relatively early age. Am J Pathol. 1994 Dec; 145(6):1444-9. Zheng J, Shu Q, Li ZH, Tsao JI, Weiss LM, Shibata D. PMID: 7992847; PMCID: PMC1887485.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    165. Follicular small lymphocytic lymphoma. Am J Surg Pathol. 1994 Oct; 18(10):999-1009. Chang KL, Arber DA, Shibata D, Rappaport H, Weiss LM. PMID: 8092400.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    166. BCL2 translocation frequency rises with age in humans. Proc Natl Acad Sci U S A. 1994 Sep 13; 91(19):8910-4. Liu Y, Hernandez AM, Shibata D, Cortopassi GA. PMID: 8090743; PMCID: PMC44716.
      View in: PubMed   Mentions: 53     Fields:    Translation:HumansCells
    167. p53 mutations and microsatellite instability in sporadic gastric cancer: when guardians fail. Cancer Res. 1994 Sep 01; 54(17):4750-5. Strickler JG, Zheng J, Shu Q, Burgart LJ, Alberts SR, Shibata D. PMID: 8062274.
      View in: PubMed   Mentions: 45     Fields:    Translation:HumansCells
    168. Biologic aspects of AIDS-related lymphoma. Curr Opin Oncol. 1994 Sep; 6(5):503-7. Shibata D. PMID: 7827154.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    169. Further evidence that one of the earliest alterations in colorectal carcinogenesis involves APC. Am J Pathol. 1994 Sep; 145(3):531-4. Tsao J, Shibata D. PMID: 8080037; PMCID: PMC1890336.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    170. Microsatellite instability in sporadic endometrial carcinoma. J Natl Cancer Inst. 1994 Aug 17; 86(16):1216-21. Duggan BD, Felix JC, Muderspach LI, Tourgeman D, Zheng J, Shibata D. PMID: 8040889.
      View in: PubMed   Mentions: 33     Fields:    Translation:HumansCells
    171. Rearrangements of the BCL-6 gene in acquired immunodeficiency syndrome-associated non-Hodgkin's lymphoma: association with diffuse large-cell subtype. Blood. 1994 Jul 15; 84(2):397-402. Gaidano G, Lo Coco F, Ye BH, Shibata D, Levine AM, Knowles DM, Dalla-Favera R. PMID: 8025268.
      View in: PubMed   Mentions: 14     Fields:    Translation:Humans
    172. Mutations in the coding region of c-MYC in AIDS-associated and other aggressive lymphomas. Cancer Res. 1994 Jul 01; 54(13):3383-6. Clark HM, Yano T, Otsuki T, Jaffe ES, Shibata D, Raffeld M. PMID: 8012955.
      View in: PubMed   Mentions: 25     Fields:    Translation:HumansCells
    173. Extraction of DNA from paraffin-embedded tissue for analysis by polymerase chain reaction: new tricks from an old friend. Hum Pathol. 1994 Jun; 25(6):561-3. Shibata D. PMID: 8013945.
      View in: PubMed   Mentions: 12     Fields:    Translation:Humans
    174. Early mutational activation of the c-Ki-ras oncogene in endometrial carcinoma. Cancer Res. 1994 Mar 15; 54(6):1604-7. Duggan BD, Felix JC, Muderspach LI, Tsao JL, Shibata DK. PMID: 8137266.
      View in: PubMed   Mentions: 17     Fields:    Translation:Humans
    175. Genomic instability in repeated sequences is an early somatic event in colorectal tumorigenesis that persists after transformation. Nat Genet. 1994 Mar; 6(3):273-81. Shibata D, Peinado MA, Ionov Y, Malkhosyan S, Perucho M. PMID: 8012390.
      View in: PubMed   Mentions: 106     Fields:    Translation:HumansCells
    176. Incidence of Epstein-Barr virus bcl-2 expression and chromosomal translocation t(14;18) in large cell lymphoma associated with paragranuloma (lymphocyte-predominant Hodgkin's disease). Hum Pathol. 1994 Mar; 25(3):240-3. Hansmann ML, Shibata D, Lorenzen J, Hell K, Nathwani BN, Fischer R. PMID: 8150454.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    177. A novel lipoxygenase from rice. Primary structure and specific expression upon incompatible infection with rice blast fungus. J Biol Chem. 1994 Feb 04; 269(5):3755-61. Peng YL, Shirano Y, Ohta H, Hibino T, Tanaka K, Shibata D. PMID: 7508918.
      View in: PubMed   Mentions: 39     Fields:    Translation:AnimalsCells
    178. c-k-ras and p53 mutations occur very early in adenocarcinoma of the lung. Am J Pathol. 1994 Feb; 144(2):303-9. Li ZH, Zheng J, Weiss LM, Shibata D. PMID: 8311114; PMCID: PMC1887136.
      View in: PubMed   Mentions: 29     Fields:    Translation:HumansCells
    179. Anatomical distribution of HTLV-I proviral sequence in an autopsy case of HTLV-I associated myelopathy: a polymerase chain reaction study. Pathol Int. 1994 Jan; 44(1):27-33. Sueyoshi K, Goto M, Johnosono M, Sato E, Shibata D. PMID: 8025646.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    180. Identification of mismatched fixed specimens with a commercially available kit based on the polymerase chain reaction. Am J Clin Pathol. 1993 Dec; 100(6):666-70. Shibata D. PMID: 8249915.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    181. Selective ultraviolet radiation fractionation and polymerase chain reaction analysis of genetic alterations. Am J Pathol. 1993 Dec; 143(6):1523-6. Shibata D. PMID: 8256844; PMCID: PMC1887282.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansAnimals
    182. Genetic heterogeneity of the c-K-ras locus in colorectal adenomas but not in adenocarcinomas. J Natl Cancer Inst. 1993 Jul 07; 85(13):1058-63. Shibata D, Schaeffer J, Li ZH, Capella G, Perucho M. PMID: 8515492.
      View in: PubMed   Mentions: 32     Fields:    Translation:Humans
    183. Ubiquitous somatic mutations in simple repeated sequences reveal a new mechanism for colonic carcinogenesis. Nature. 1993 Jun 10; 363(6429):558-61. Ionov Y, Peinado MA, Malkhosyan S, Shibata D, Perucho M. PMID: 8505985.
      View in: PubMed   Mentions: 674     Fields:    Translation:HumansCells
    184. Epstein-Barr virus-associated gastric adenocarcinoma among Japanese Americans in Hawaii. Cancer Epidemiol Biomarkers Prev. 1993 May-Jun; 2(3):213-7. Shibata D, Hawes D, Stemmermann GN, Weiss LM. PMID: 8391356.
      View in: PubMed   Mentions: 24     Fields:    Translation:HumansCells
    185. Epstein-Barr virus-associated non-Hodgkin's lymphoma in patients infected with the human immunodeficiency virus. Blood. 1993 Apr 15; 81(8):2102-9. Shibata D, Weiss LM, Hernandez AM, Nathwani BN, Bernstein L, Levine AM. PMID: 8386027.
      View in: PubMed   Mentions: 31     Fields:    Translation:HumansCells
    186. Description of an in situ hybridization methodology for detection of Epstein-Barr virus RNA in paraffin-embedded tissues, with a survey of normal and neoplastic tissues. Diagn Mol Pathol. 1992 Dec; 1(4):246-55. Chang KL, Chen YY, Shibata D, Weiss LM. PMID: 1342973.
      View in: PubMed   Mentions: 65     Fields:    Translation:HumansCells
    187. Epidemiological and biological study of acquired immunodeficiency syndrome-related lymphoma in the County of Los Angeles: preliminary results. Cancer Res. 1992 Oct 01; 52(19 Suppl):5482s-5484s. Levine AM, Shibata D, Sullivan-Halley J, Nathwani B, Brynes R, Slovak ML, Mahterian S, Riley CL, Weiss L, Levine PH, et al. PMID: 1327509.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    188. Epstein-Barr virus genotypes in AIDS-associated lymphomas are similar to those in endemic Burkitt's lymphomas. Leukemia. 1992 Sep; 6(9):875-8. Goldschmidts WL, Bhatia K, Johnson JF, Akar N, Gutiérrez MI, Shibata D, Carolan M, Levine A, Magrath IT. PMID: 1325581.
      View in: PubMed   Mentions: 13     Fields:    Translation:HumansCells
    189. Characterization of the topography of Epstein-Barr virus infection in human immunodeficiency virus-associated lymphoid tissues. Mod Pathol. 1992 Sep; 5(5):559-66. Arber DA, Shibata D, Chen YY, Weiss LM. PMID: 1344820.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    190. Specific genetic analysis of microscopic tissue after selective ultraviolet radiation fractionation and the polymerase chain reaction. Am J Pathol. 1992 Sep; 141(3):539-43. Shibata D, Hawes D, Li ZH, Hernandez AM, Spruck CH, Nichols PW. PMID: 1325739; PMCID: PMC1886704.
      View in: PubMed   Mentions: 30     Fields:    Translation:HumansCells
    191. A pattern of accumulation of a somatic deletion of mitochondrial DNA in aging human tissues. Proc Natl Acad Sci U S A. 1992 Aug 15; 89(16):7370-4. Cortopassi GA, Shibata D, Soong NW, Arnheim N. PMID: 1502147; PMCID: PMC49711.
      View in: PubMed   Mentions: 146     Fields:    Translation:Humans
    192. PCR diagnostics of herpes-virus-group infections. Ann Med. 1992 Jun; 24(3):221-4. Shibata D. PMID: 1320899.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    193. Recombination between feline leukemia virus subgroup B or C and endogenous env elements alters the in vitro biological activities of the viruses. J Virol. 1992 Jun; 66(6):3976. Pandey R, Ghosh AK, Kumar DV, Bachman BA, Shibata D, Roy-Burman P. PMID: 1316496; PMCID: PMC241193.
      View in: PubMed   Mentions:    Fields:    Translation:Cells
    194. cDNA cloning of rice lipoxygenase L-2 and characterization using an active enzyme expressed from the cDNA in Escherichia coli. Eur J Biochem. 1992 Jun 01; 206(2):331-6. Ohta H, Shirano Y, Tanaka K, Morita Y, Shibata D. PMID: 1597177.
      View in: PubMed   Mentions: 20     Fields:    Translation:AnimalsCells
    195. Epstein-Barr virus-associated gastric adenocarcinoma. Am J Pathol. 1992 Apr; 140(4):769-74. Shibata D, Weiss LM. PMID: 1314023; PMCID: PMC1886378.
      View in: PubMed   Mentions: 212     Fields:    Translation:HumansCells
    196. Detection and localization of Epstein-Barr viral genomes in angioimmunoblastic lymphadenopathy and angioimmunoblastic lymphadenopathy-like lymphoma. Blood. 1992 Apr 01; 79(7):1789-95. Weiss LM, Jaffe ES, Liu XF, Chen YY, Shibata D, Medeiros LJ. PMID: 1373088.
      View in: PubMed   Mentions: 52     Fields:    Translation:HumansCells
    197. [Bcl-2 in potentials precursors of nodular paragranuloma and its dedifferentiated variant (large cell B-lymphoma)]. Verh Dtsch Ges Pathol. 1992; 76:169-72. Lorenzen J, Hansmann ML, Shibata D, Hell K, Klöckner A, Pezzella F, Fischer R. PMID: 1283252.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    198. Epstein-Barr virus and Hodgkin's disease. A correlative in situ hybridization and polymerase chain reaction study. Am J Pathol. 1991 Dec; 139(6):1259-65. Weiss LM, Chen YY, Liu XF, Shibata D. PMID: 1661073; PMCID: PMC1886470.
      View in: PubMed   Mentions: 52     Fields:    Translation:HumansCells
    199. Epstein-Barr virus infections and Hodgkin's disease: a study of fixed tissues using the polymerase chain reaction. Hum Pathol. 1991 Dec; 22(12):1262-7. Shibata D, Hansmann ML, Weiss LM, Nathwani BN. PMID: 1660852.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansCells
    200. Recombination between feline leukemia virus subgroup B or C and endogenous env elements alters the in vitro biological activities of the viruses. J Virol. 1991 Dec; 65(12):6495-508. Pandey R, Ghosh AK, Kumar DV, Bachman BA, Shibata D, Roy-Burman P. PMID: 1658356; PMCID: PMC250696.
      View in: PubMed   Mentions: 23     Fields:    Translation:HumansAnimalsCells
    201. Association of Epstein-Barr virus with undifferentiated gastric carcinomas with intense lymphoid infiltration. Lymphoepithelioma-like carcinoma. Am J Pathol. 1991 Sep; 139(3):469-74. Shibata D, Tokunaga M, Uemura Y, Sato E, Tanaka S, Weiss LM. PMID: 1653517; PMCID: PMC1886210.
      View in: PubMed   Mentions: 95     Fields:    Translation:HumansCells
    202. Lymphoepithelioma-like carcinoma and its relationship to Epstein-Barr virus. Am J Clin Pathol. 1991 Aug; 96(2):156-8. Weiss LM, Gaffey MJ, Shibata D. PMID: 1650531.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansCells
    203. Fixed human tissues: a resource for the identification of individuals. J Forensic Sci. 1991 Jul; 36(4):1204-12. Shibata D, Kurosu M, Noguchi TT. PMID: 1919478.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    204. Epstein-Barr virus in benign lymph node biopsies from individuals infected with the human immunodeficiency virus is associated with concurrent or subsequent development of non-Hodgkin's lymphoma. Blood. 1991 Apr 01; 77(7):1527-33. Shibata D, Weiss LM, Nathwani BN, Brynes RK, Levine AM. PMID: 1849034.
      View in: PubMed   Mentions: 28     Fields:    Translation:HumansCells
    205. Detection of human T-cell leukemia virus type I proviral sequences from fixed tissues of seropositive patients. Am J Clin Pathol. 1991 Apr; 95(4):536-9. Shibata D, Tokunaga M, Sasaki N, Nanba K. PMID: 2014780.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansCells
    206. Epstein-Barr virus and T-cell lymphoma. Am J Hematol. 1991 Feb; 36(2):160. Liang R, Shibata D. PMID: 1849349.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    207. Nucleotide sequences of a soybean lipoxygenase gene and the short intergenic region between an upstream lipoxygenase gene. Plant Mol Biol. 1991 Feb; 16(2):353-9. Shibata D, Kato T, Tanaka K. PMID: 1909908.
      View in: PubMed   Mentions: 13     Fields:    Translation:AnimalsCells
    208. Identification of a mislabeled fixed specimen by DNA analysis. Am J Surg Pathol. 1990 Nov; 14(11):1076-8. Shibata D, Namiki T, Higuchi R. PMID: 2240357.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    209. Phytochrome-mediated activation of the gene for cytosolic glutamine-synthetase (GS1) during imbibition of photosensitive lettuce seeds. Plant Mol Biol. 1990 Aug; 15(2):317-23. Sakamoto A, Takeba G, Shibata D, Tanaka K. PMID: 1983300.
      View in: PubMed   Mentions: 14     Fields:    Translation:AnimalsCells
    210. Mutational activation of the c-K-ras gene in human pancreatic carcinoma. Baillieres Clin Gastroenterol. 1990 Mar; 4(1):151-69. Shibata D, Capella G, Perucho M. PMID: 1976394.
      View in: PubMed   Mentions: 17     Fields:    Translation:Humans
    211. Detection of c-K-ras mutations in fine needle aspirates from human pancreatic adenocarcinomas. Cancer Res. 1990 Feb 15; 50(4):1279-83. Shibata D, Almoguera C, Forrester K, Dunitz J, Martin SE, Cosgrove MM, Perucho M, Arnheim N. PMID: 2404591.
      View in: PubMed   Mentions: 37     Fields:    Translation:Humans
    212. Detection of specific t(14;18) chromosomal translocations in fixed tissues. Hum Pathol. 1990 Feb; 21(2):199-203. Shibata D, Hu E, Weiss LM, Brynes RK, Nathwani BN. PMID: 2307446.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    213. Detection of occult CNS involvement of follicular small cleaved lymphoma by the polymerase chain reaction. Mod Pathol. 1990 Jan; 3(1):71-5. Shibata D, Nichols P, Sherrod A, Rabinowitz A, Bernstein-Singer L, Hu E. PMID: 2308923.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    214. Human T-cell lymphotropic virus type I (HTLV-I)-associated adult T-cell leukemia-lymphoma in a patient infected with human immunodeficiency virus type 1 (HIV-1). Ann Intern Med. 1989 Dec 01; 111(11):871-5. Shibata D, Brynes RK, Rabinowitz A, Hanson CA, Slovak ML, Spira TJ, Gill P. PMID: 2573306.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    215. Three cDNA sequences coding for glutamine synthetase polypeptides in Oryza sativa L. Plant Mol Biol. 1989 Nov; 13(5):611-4. Sakamoto A, Ogawa M, Masumura T, Shibata D, Takeba G, Tanaka K, Fujii S. PMID: 2577497.
      View in: PubMed   Mentions: 27     Fields:    Translation:AnimalsCells
    216. Analysis of human immunodeficiency virus and cytomegalovirus infection by polymerase chain reaction in the acquired immunodeficiency syndrome. An autopsy study. Arch Pathol Lab Med. 1989 Nov; 113(11):1239-44. Shibata D, Klatt EC. PMID: 2554843.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansCells
    217. Human immunodeficiency viral DNA is readily found in lymph node biopsies from seropositive individuals. Analysis of fixed tissue using the polymerase chain reaction. Am J Pathol. 1989 Oct; 135(4):697-702. Shibata D, Brynes RK, Nathwani B, Kwok S, Sninsky J, Arnheim N. PMID: 2679114; PMCID: PMC1880034.
      View in: PubMed   Mentions: 9     Fields:    Translation:HumansCells
    218. Postmortem enzyme immunoassay for human immunodeficiency virus. Arch Pathol Lab Med. 1989 May; 113(5):485-7. Klatt EC, Shibata D, Strigle SM. PMID: 2653271.
      View in: PubMed   Mentions: 6     Fields:    Translation:Humans
    219. Detection of human papillomavirus in formalin-fixed, invasive squamous carcinomas using the polymerase chain reaction. Am J Surg Pathol. 1989 Mar; 13(3):221-4. Kiyabu MT, Shibata D, Arnheim N, Martin WJ, Fitzgibbons PL. PMID: 2537583.
      View in: PubMed   Mentions: 28     Fields:    Translation:HumansCells
    220. Detection of human papillomavirus DNA in fine-needle aspirations of metastatic squamous-cell carcinoma of the uterine cervix using the polymerase chain reaction. Diagn Cytopathol. 1989; 5(1):40-3. Shibata D, Cosgrove M, Arnheim N, Martin WJ, Martin SE. PMID: 2541988.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    221. Detection of cytomegalovirus DNA in peripheral blood of patients infected with human immunodeficiency virus. J Infect Dis. 1988 Dec; 158(6):1185-92. Shibata D, Martin WJ, Appleman MD, Causey DM, Leedom JM, Arnheim N. PMID: 2848898.
      View in: PubMed   Mentions: 69     Fields:    Translation:HumansCells
    222. Detection of human papillomavirus in normal and dysplastic tissue by the polymerase chain reaction. Lab Invest. 1988 Oct; 59(4):555-9. Shibata D, Fu YS, Gupta JW, Shah KV, Arnheim N, Martin WJ. PMID: 2845193.
      View in: PubMed   Mentions: 21     Fields:    Translation:HumansCells
    223. Analysis of DNA sequences in forty-year-old paraffin-embedded thin-tissue sections: a bridge between molecular biology and classical histology. Cancer Res. 1988 Aug 15; 48(16):4564-6. Shibata D, Martin WJ, Arnheim N. PMID: 2840197.
      View in: PubMed   Mentions: 38     Fields:    Translation:HumansCells
    224. Most human carcinomas of the exocrine pancreas contain mutant c-K-ras genes. Cell. 1988 May 20; 53(4):549-54. Almoguera C, Shibata D, Forrester K, Martin J, Arnheim N, Perucho M. PMID: 2453289.
      View in: PubMed   Mentions: 658     Fields:    Translation:HumansCells
    225. Primary structure of soybean lipoxygenase L-2. J Biol Chem. 1988 May 15; 263(14):6816-21. Shibata D, Steczko J, Dixon JE, Andrews PC, Hermodson M, Axelrod B. PMID: 2834391.
      View in: PubMed   Mentions: 34     Fields:    Translation:AnimalsCells
    226. Cytomegalovirus infection in the acquired immunodeficiency syndrome. Clinical and autopsy findings. Arch Pathol Lab Med. 1988 May; 112(5):540-4. Klatt EC, Shibata D. PMID: 2833874.
      View in: PubMed   Mentions: 21     Fields:    Translation:Humans
    227. Detection of human papilloma virus in paraffin-embedded tissue using the polymerase chain reaction. J Exp Med. 1988 Jan 01; 167(1):225-30. Shibata DK, Arnheim N, Martin WJ. PMID: 2826637; PMCID: PMC2188813.
      View in: PubMed   Mentions: 176     Fields:    Translation:Cells
    228. Malignant peripheral nerve sheath tumor arising in an adrenal ganglioneuroma in an adult male homosexual. Cancer. 1986 May 15; 57(10):2022-5. Chandrasoma P, Shibata D, Radin R, Brown LP, Koss M. PMID: 3955508.
      View in: PubMed   Mentions: 8     Fields:    Translation:Humans
    229. Genetic complementation by cloned bacteriophage T4 late genes. J Virol. 1981 Jul; 39(1):31-45. Jacobs KA, Albright LM, Shibata DK, Geiduschek EP. PMID: 6456362; PMCID: PMC171262.
      View in: PubMed   Mentions: 9     Fields:    Translation:Cells
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