Arijita Sarkar

Title(s)Research Associate
SchoolKeck School of Medicine of Usc
AddressNRT - 1450 Biggy Street, #4513
Health Sciences Campus
Los Angeles CA 90033
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. MicroRNA mediated gene regulatory circuits leads to machine learning based preliminary detection of acute myeloid leukemia. Comput Biol Chem. 2023 Jun; 104:107859. Sarkar A, Das T, Das G, Ghosh Z. PMID: 37031648.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    2. Inhibition of a signaling modality within the gp130 receptor enhances tissue regeneration and mitigates osteoarthritis. Sci Transl Med. 2023 03 22; 15(688):eabq2395. Shkhyan R, Flynn C, Lamoure E, Sarkar A, Van Handel B, Li J, York J, Banks N, Van der Horst R, Liu NQ, Lee S, Bajaj P, Vadivel K, Harn HI, Tassey J, Lozito T, Lieberman JR, Chuong CM, Hurtig MS, Evseenko D. PMID: 36947594; PMCID: PMC10792550.
      View in: PubMed   Mentions: 5     Fields:    Translation:Animals
    3. STAT3 promotes a youthful epigenetic state in articular chondrocytes. Aging Cell. 2023 02; 22(2):e13773. Sarkar A, Liu NQ, Magallanes J, Tassey J, Lee S, Shkhyan R, Lee Y, Lu J, Ouyang Y, Tang H, Bian F, Tao L, Segil N, Ernst J, Lyons K, Horvath S, Evseenko D. PMID: 36638270; PMCID: PMC9924946.
      View in: PubMed   Mentions: 5     Fields:    Translation:HumansAnimalsCells
    4. Heightened miR6024-NLR interactions facilitate necrotrophic pathogenesis in tomato. Plant Mol Biol. 2022 Aug; 109(6):717-739. Dey S, Sarkar A, Chowdhury S, Singh R, Mukherjee A, Ghosh Z, Kundu P. PMID: 35499677.
      View in: PubMed   Mentions: 12     Fields:    Translation:Animals
    5. Author Correction: gp130/STAT3 signaling is required for homeostatic proliferation and anabolism in postnatal growth plate and articular chondrocytes. Commun Biol. 2022 Feb 25; 5(1):200. Liu NQ, Lin Y, Li L, Lu J, Geng D, Zhang J, Jashashvili T, Buser Z, Magallanes J, Tassey J, Shkhyan R, Sarkar A, Lopez N, Lee S, Lee Y, Wang L, Petrigliano FA, Van Handel B, Lyons K, Evseenko D. PMID: 35217719; PMCID: PMC8881627.
      View in: PubMed   Mentions:
    6. gp130/STAT3 signaling is required for homeostatic proliferation and anabolism in postnatal growth plate and articular chondrocytes. Commun Biol. 2022 01 17; 5(1):64. Liu NQ, Lin Y, Li L, Lu J, Geng D, Zhang J, Jashashvili T, Buser Z, Magallanes J, Tassey J, Shkhyan R, Sarkar A, Lopez N, Lee S, Lee Y, Wang L, Petrigliano FA, Van Handel B, Lyons K, Evseenko D. PMID: 35039652; PMCID: PMC8763901.
      View in: PubMed   Mentions: 6  Translation:AnimalsCells
    7. piRNAQuest V.2: an updated resource for searching through the piRNAome of multiple species. RNA Biol. 2022; 19(1):12-25. Ghosh B, Sarkar A, Mondal S, Bhattacharya N, Khatua S, Ghosh Z. PMID: 34965192; PMCID: PMC8786328.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansAnimalsCells
    8. Long-term repair of porcine articular cartilage using cryopreservable, clinically compatible human embryonic stem cell-derived chondrocytes. NPJ Regen Med. 2021 Nov 23; 6(1):77. Petrigliano FA, Liu NQ, Lee S, Tassey J, Sarkar A, Lin Y, Li L, Yu Y, Geng D, Zhang J, Shkhyan R, Bogdanov J, Van Handel B, Ferguson GB, Lee Y, Hinderer S, Tseng KC, Kavanaugh A, Crump JG, Pyle AD, Schenke-Layland K, Billi F, Wang L, Lieberman J, Hurtig M, Evseenko D. PMID: 34815400; PMCID: PMC8611001.
      View in: PubMed   Mentions: 4  
    9. A Single-Cell Culture System for Dissecting Microenvironmental Signaling in Development and Disease of Cartilage Tissue. Front Cell Dev Biol. 2021; 9:725854. Tassey J, Sarkar A, Van Handel B, Lu J, Lee S, Evseenko D. PMID: 34733842; PMCID: PMC8558457.
      View in: PubMed   Mentions:
    10. Symmetry breaking of tissue mechanics in wound induced hair follicle regeneration of laboratory and spiny mice. Nat Commun. 2021 05 10; 12(1):2595. Harn HI, Wang SP, Lai YC, Van Handel B, Liang YC, Tsai S, Schiessl IM, Sarkar A, Xi H, Hughes M, Kaemmer S, Tang MJ, Peti-Peterdi J, Pyle AD, Woolley TE, Evseenko D, Jiang TX, Chuong CM. PMID: 33972536; PMCID: PMC8110808.
      View in: PubMed   Mentions: 23     Fields:    Translation:AnimalsCells
    11. Unraveling the role of H3K4 trimethylation and lncRNA HOTAIR in SATB1 and DUSP4-dependent survival of virulent Mycobacterium tuberculosis in macrophages. Tuberculosis (Edinb). 2020 01; 120:101897. Subuddhi A, Kumar M, Majumder D, Sarkar A, Ghosh Z, Vasudevan M, Kundu M, Basu J. PMID: 32090865.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansCells
    12. Exploring the major cross-talking edges of competitive endogenous RNA networks in human Chronic and Acute Myeloid Leukemia. Biochim Biophys Acta Gen Subj. 2018 09; 1862(9):1883-1892. Sen K, Bhattacharyya D, Sarkar A, Das J, Maji N, Basu M, Ghosh Z, Ghosh TC. PMID: 29902552.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansCells
    13. Dissecting the variation in transcriptional circuits between naive and primed pluripotent states. FEBS Lett. 2017 08; 591(15):2362-2375. Deb A, Sarkar A, Ghosh Z. PMID: 28649717.
      View in: PubMed   Mentions: 4     Fields:    Translation:AnimalsCells
    14. Integrated miRNA and mRNA expression profiling reveals the response regulators of a susceptible tomato cultivar to early blight disease. DNA Res. 2017 Jun 01; 24(3):235-250. Sarkar D, Maji RK, Dey S, Sarkar A, Ghosh Z, Kundu P. PMID: 28338918; PMCID: PMC5499734.
      View in: PubMed   Mentions: 21     Fields:    Translation:AnimalsCells
    15. Small RNA sequencing revealed dysregulated piRNAs in Alzheimer's disease and their probable role in pathogenesis. Mol Biosyst. 2017 Feb 28; 13(3):565-576. Roy J, Sarkar A, Parida S, Ghosh Z, Mallick B. PMID: 28127595.
      View in: PubMed   Mentions: 51     Fields:    Translation:HumansCells
    16. Deciphering the cross-talking of human competitive endogenous RNAs in K562 chronic myelogenous leukemia cell line. Mol Biosyst. 2016 11 15; 12(12):3633-3642. Sen K, Sarkar A, Maji RK, Ghosh Z, Gupta S, Ghosh TC. PMID: 27730241.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    17. piRNAQuest: searching the piRNAome for silencers. BMC Genomics. 2014 Jul 04; 15:555. Sarkar A, Maji RK, Saha S, Ghosh Z. PMID: 24997126; PMCID: PMC4227290.
      View in: PubMed   Mentions: 25     Fields:    Translation:HumansAnimalsCells
    18. PVT: an efficient computational procedure to speed up next-generation sequence analysis. BMC Bioinformatics. 2014 Jun 04; 15:167. Maji RK, Sarkar A, Khatua S, Dasgupta S, Ghosh Z. PMID: 24894600; PMCID: PMC4063226.
      View in: PubMed   Mentions: 3     Fields:    Translation:Humans
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