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Justin Haldar, PhD

Title(s)Associate Professor of Electrical Engineering
Phone+1 213 740 2358
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    Collapse Research 
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    Faster MRI with Sparse Sampling and Low-Rank Modeling
    NIH/NIBIB R21EB022951Jul 1, 2016 - Apr 30, 2018
    Role: Principal Investigator

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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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    1. Haldar JP, Kim D. OEDIPUS: An Experiment Design Framework for Sparsity-Constrained MRI. IEEE Trans Med Imaging. 2019 Jul; 38(7):1545-1558. PMID: 30716031.
      View in: PubMed
    2. Habibi A, Damasio A, Ilari B, Veiga R, Joshi AA, Leahy RM, Haldar JP, Varadarajan D, Bhushan C, Damasio H. Childhood Music Training Induces Change in Micro and Macroscopic Brain Structure: Results from a Longitudinal Study. Cereb Cortex. 2018 Dec 01; 28(12):4336-4347. PMID: 29126181.
      View in: PubMed
    3. Li J, Haldar J, Mosher JC, Nair D, Gonzalez-Martinez J, Leahy RM. Scalable and Robust Tensor Decomposition of Spontaneous Stereotactic EEG Data. IEEE Trans Biomed Eng. 2018 Oct 11. PMID: 30307856.
      View in: PubMed
    4. Zhao B, Haldar JP, Liao C, Ma D, Jiang Y, Griswold MA, Setsompop K, Wald LL. Optimal Experiment Design for Magnetic Resonance Fingerprinting: Cramér-Rao Bound Meets Spin Dynamics. IEEE Trans Med Imaging. 2018 Oct 04. PMID: 30295618.
      View in: PubMed
    5. Kim TH, Bilgic B, Polak D, Setsompop K, Haldar JP. Wave-LORAKS: Combining wave encoding with structured low-rank matrix modeling for more highly accelerated 3D imaging. Magn Reson Med. 2019 Mar; 81(3):1620-1633. PMID: 30252157.
      View in: PubMed
    6. Kim D, Wisnowski JL, Nguyen CT, Haldar JP. PROBING IN VIVO MICROSTRUCTURE WITH T1-T2 RELAXATION CORRELATION SPECTROSCOPIC IMAGING. Proc IEEE Int Symp Biomed Imaging. 2018 Apr; 2018:675-678. PMID: 30854157.
      View in: PubMed
    7. Kim TH, Haldar JP. THE FOURIER RADIAL ERROR SPECTRUM PLOT: A MORE NUANCED QUANTITATIVE EVALUATION OF IMAGE RECONSTRUCTION QUALITY. Proc IEEE Int Symp Biomed Imaging. 2018 Apr; 2018:61-64. PMID: 31007839.
      View in: PubMed
    8. Lobos RA, Javed A, Nayak KS, Hoge WS, Haldar JP. ROBUST AUTOCALIBRATED LORAKS FOR EPI GHOST CORRECTION. Proc IEEE Int Symp Biomed Imaging. 2018 Apr; 2018:663-666. PMID: 30984344.
      View in: PubMed
    9. Varadarajan D, Haldar JP. TOWARDS OPTIMAL LINEAR ESTIMATION OF ORIENTATION DISTRIBUTION FUNCTIONS WITH ARBITRARILY SAMPLED DIFFUSION MRI DATA. Proc IEEE Int Symp Biomed Imaging. 2018 Apr; 2018:743-746. PMID: 30956753.
      View in: PubMed
    10. Kim B, Fisher BE, Schweighofer N, Leahy RM, Haldar JP, Choi S, Kay DB, Gordon J, Winstein CJ. A comparison of seven different DTI-derived estimates of corticospinal tract structural characteristics in chronic stroke survivors. J Neurosci Methods. 2018 Jul 01; 304:66-75. PMID: 29684462.
      View in: PubMed
    11. Lobos RA, Kim TH, Hoge WS, Haldar JP. Navigator-Free EPI Ghost Correction With Structured Low-Rank Matrix Models: New Theory and Methods. IEEE Trans Med Imaging. 2018 11; 37(11):2390-2402. PMID: 29993978.
      View in: PubMed
    12. Bilgic B, Kim TH, Liao C, Manhard MK, Wald LL, Haldar JP, Setsompop K. Improving parallel imaging by jointly reconstructing multi-contrast data. Magn Reson Med. 2018 08; 80(2):619-632. PMID: 29322551.
      View in: PubMed
    13. Varadarajan D, Haldar JP. A theoretical signal processing framework for linear diffusion MRI: Implications for parameter estimation and experiment design. Neuroimage. 2017 11 01; 161:206-218. PMID: 28830765.
      View in: PubMed
    14. Chong M, Bhushan C, Joshi AA, Choi S, Haldar JP, Shattuck DW, Spreng RN, Leahy RM. Individual parcellation of resting fMRI with a group functional connectivity prior. Neuroimage. 2017 08 01; 156:87-100. PMID: 28478226.
      View in: PubMed
    15. Kim D, Doyle EK, Wisnowski JL, Kim JH, Haldar JP. Diffusion-relaxation correlation spectroscopic imaging: A multidimensional approach for probing microstructure. Magn Reson Med. 2017 Dec; 78(6):2236-2249. PMID: 28317261.
      View in: PubMed
    16. Haldar JP, Setsompop K, Wald LL. Optimal experiment design for magnetic resonance fingerprinting. Conf Proc IEEE Eng Med Biol Soc. 2016 08; 2016:453-456. PMID: 28268369.
      View in: PubMed
    17. Bhushan C, Chong M, Choi S, Joshi AA, Haldar JP, Damasio H, Leahy RM. Temporal Non-Local Means Filtering Reveals Real-Time Whole-Brain Cortical Interactions in Resting fMRI. PLoS One. 2016; 11(7):e0158504. PMID: 27391481.
      View in: PubMed
    18. Kim TH, Setsompop K, Haldar JP. LORAKS makes better SENSE: Phase-constrained partial fourier SENSE reconstruction without phase calibration. Magn Reson Med. 2017 03; 77(3):1021-1035. PMID: 27037836.
      View in: PubMed
    19. Kim D, Haldar JP. Greedy Algorithms for Nonnegativity-Constrained Simultaneous Sparse Recovery. Signal Processing. 2016 Aug; 125:274-289. PMID: 26973368.
      View in: PubMed
    20. Haldar JP, Zhuo J. P-LORAKS: Low-rank modeling of local k-space neighborhoods with parallel imaging data. Magn Reson Med. 2016 Apr; 75(4):1499-514. PMID: 25952136.
      View in: PubMed
    21. Varadarajan D, Haldar JP. A majorize-minimize framework for Rician and non-central chi MR images. IEEE Trans Med Imaging. 2015 Oct; 34(10):2191-202. PMID: 25935028.
      View in: PubMed
    22. Chambers MC, Bhushan C, Haldar JP, Leahy RM, Shattuck DW. CORRECTING INHOMOGENEITY-INDUCED DISTORTION IN FMRI USING NON-RIGID REGISTRATION. Proc IEEE Int Symp Biomed Imaging. 2015 Apr; 2015:1364-1367. PMID: 26617955.
      View in: PubMed
    23. Kim JH, Song SK, Haldar JP. Signal-to-noise ratio-enhancing joint reconstruction for improved diffusion imaging of mouse spinal cord white matter injury. Magn Reson Med. 2016 Feb; 75(2):852-8. PMID: 25824472.
      View in: PubMed
    24. Bhushan C, Haldar JP, Choi S, Joshi AA, Shattuck DW, Leahy RM. Co-registration and distortion correction of diffusion and anatomical images based on inverse contrast normalization. Neuroimage. 2015 Jul 15; 115:269-80. PMID: 25827811.
      View in: PubMed
    25. Habibi A, Ilari B, Crimi K, Metke M, Kaplan JT, Joshi AA, Leahy RM, Shattuck DW, Choi SY, Haldar JP, Ficek B, Damasio A, Damasio H. An equal start: absence of group differences in cognitive, social, and neural measures prior to music or sports training in children. Front Hum Neurosci. 2014; 8:690. PMID: 25249961.
      View in: PubMed
    26. Lam F, Babacan SD, Haldar JP, Weiner MW, Schuff N, Liang ZP. Denoising diffusion-weighted magnitude MR images using rank and edge constraints. Magn Reson Med. 2014 Mar; 71(3):1272-84. PMID: 23568755; PMCID: PMC3796128.
    27. Haldar JP. Low-rank modeling of local k-space neighborhoods (LORAKS) for constrained MRI. IEEE Trans Med Imaging. 2014 Mar; 33(3):668-81. PMID: 24595341.
      View in: PubMed
    28. Bhushan C, Joshi AA, Leahy RM, Haldar JP. Improved B0 -distortion correction in diffusion MRI using interlaced q-space sampling and constrained reconstruction. Magn Reson Med. 2014 Nov; 72(5):1218-32. PMID: 24464424.
      View in: PubMed
    29. Lin Y, Haldar JP, Li Q, Conti PS, Leahy RM. Sparsity Constrained Mixture Modeling for the Estimation of Kinetic Parameters in Dynamic PET. IEEE Trans Med Imaging. 2014 Jan; 33(1):173-85. PMID: 24216681.
      View in: PubMed
    30. Ashrafulla S, Haldar JP, Joshi AA, Leahy RM. Canonical Granger causality between regions of interest. Neuroimage. 2013 Dec; 83:189-99. PMID: 23811410.
      View in: PubMed
    31. Gai J, Obeid N, Holtrop JL, Wu XL, Lam F, Fu M, Haldar JP, Hwu WM, Liang ZP, Sutton BP. More IMPATIENT: A Gridding-Accelerated Toeplitz-based Strategy for Non-Cartesian High-Resolution 3D MRI on GPUs. J Parallel Distrib Comput. 2013 May 01; 73(5):686-697. PMID: 23682203.
      View in: PubMed
    32. Haldar JP, Leahy RM. Linear transforms for Fourier data on the sphere: application to high angular resolution diffusion MRI of the brain. Neuroimage. 2013 May 01; 71:233-47. PMID: 23353603.
      View in: PubMed
    33. Bhushan C, Haldar JP, Joshi AA, Leahy RM. Correcting Susceptibility-Induced Distortion in Diffusion-Weighted MRI using Constrained Nonrigid Registration. Signal Inf Process Assoc Annu Summit Conf APSIPA Asia Pac. 2012 Dec; 2012. PMID: 26767197.
      View in: PubMed
    34. Zhao B, Haldar JP, Christodoulou AG, Liang ZP. Image reconstruction from highly undersampled (k, t)-space data with joint partial separability and sparsity constraints. IEEE Trans Med Imaging. 2012 Sep; 31(9):1809-20. PMID: 22695345.
      View in: PubMed
    35. Haldar JP, Wedeen VJ, Nezamzadeh M, Dai G, Weiner MW, Schuff N, Liang ZP. Improved diffusion imaging through SNR-enhancing joint reconstruction. Magn Reson Med. 2013 Jan; 69(1):277-89. PMID: 22392528; PMCID: PMC3407310.
    36. Wang Y, Wang Q, Haldar JP, Yeh FC, Xie M, Sun P, Tu TW, Trinkaus K, Klein RS, Cross AH, Song SK. Quantification of increased cellularity during inflammatory demyelination. Brain. 2011 Dec; 134(Pt 12):3590-601. PMID: 22171354.
      View in: PubMed
    37. Haldar JP, Wang Z, Popescu G, Liang ZP. Deconvolved spatial light interference microscopy for live cell imaging. IEEE Trans Biomed Eng. 2011 Sep; 58(9):2489-97. PMID: 21622067.
      View in: PubMed
    38. Hernando D, Karampinos DC, King KF, Haldar JP, Majumdar S, Georgiadis JG, Liang ZP. Removal of olefinic fat chemical shift artifact in diffusion MRI. Magn Reson Med. 2011 Mar; 65(3):692-701. PMID: 21337402.
      View in: PubMed
    39. Haldar JP, Hernando D, Liang ZP. Compressed-sensing MRI with random encoding. IEEE Trans Med Imaging. 2011 Apr; 30(4):893-903. PMID: 20937579.
      View in: PubMed
    40. John R, Rezaeipoor R, Adie SG, Chaney EJ, Oldenburg AL, Marjanovic M, Haldar JP, Sutton BP, Boppart SA. In vivo magnetomotive optical molecular imaging using targeted magnetic nanoprobes. Proc Natl Acad Sci U S A. 2010 May 04; 107(18):8085-90. PMID: 20404194.
      View in: PubMed
    41. Haldar JP, Wang Z, Popescu G, Liang ZP. Label-free high-resolution imaging of live cells with deconvolved spatial light interference microscopy. Conf Proc IEEE Eng Med Biol Soc. 2010; 2010:3382-5. PMID: 21097241.
      View in: PubMed
    42. Zhao B, Haldar JP, Liang ZP. PSF model-based reconstruction with sparsity constraint: algorithm and application to real-time cardiac MRI. Conf Proc IEEE Eng Med Biol Soc. 2010; 2010:3390-3. PMID: 21097243.
      View in: PubMed
    43. Hernando D, Kellman P, Haldar JP, Liang ZP. Robust water/fat separation in the presence of large field inhomogeneities using a graph cut algorithm. Magn Reson Med. 2010 Jan; 63(1):79-90. PMID: 19859956.
      View in: PubMed
    44. Peng X, Nguyen H, Haldar J, Hernando D, Wang XP, Liang ZP. Correction of field inhomogeneity effects on limited k-space MRSI data using anatomical constraints. Conf Proc IEEE Eng Med Biol Soc. 2010; 2010:883-6. PMID: 21097201.
      View in: PubMed
    45. Christodoulou AG, Brinegar C, Haldar JP, Zhang H, Wu YJ, Foley LM, Hitchens T, Ye Q, Ho C, Liang ZP. High-resolution cardiac MRI using partially separable functions and weighted spatial smoothness regularization. Conf Proc IEEE Eng Med Biol Soc. 2010; 2010:871-4. PMID: 21097198.
      View in: PubMed
    46. Haldar JP, Hernando D. Rank-Constrained Solutions to Linear Matrix Equations Using PowerFactorization. IEEE Signal Process Lett. 2009; 16(7):584-587. PMID: 22389578.
      View in: PubMed
    47. Nguyen HM, Gahvari ZJ, Haldar JP, Do MN, Liang ZP. Cramér-Rao bound analysis of echo time selection for (1)H-MR spectroscopy. Conf Proc IEEE Eng Med Biol Soc. 2009; 2009:2692-5. PMID: 19963542.
      View in: PubMed
    48. Stone SS, Haldar JP, Tsao SC, Hwu WM, Sutton BP, Liang ZP. Accelerating Advanced MRI Reconstructions on GPUs. J Parallel Distrib Comput. 2008 Oct; 68(10):1307-1318. PMID: 21796230.
      View in: PubMed
    49. Kim JH, Haldar J, Liang ZP, Song SK. Diffusion tensor imaging of mouse brain stem and cervical spinal cord. J Neurosci Methods. 2009 Jan 30; 176(2):186-91. PMID: 18834905.
      View in: PubMed
    50. Haldar JP, Hernando D, Song SK, Liang ZP. Anatomically constrained reconstruction from noisy data. Magn Reson Med. 2008 Apr; 59(4):810-8. PMID: 18383297.
      View in: PubMed
    51. Hernando D, Haldar JP, Sutton BP, Ma J, Kellman P, Liang ZP. Joint estimation of water/fat images and field inhomogeneity map. Magn Reson Med. 2008 Mar; 59(3):571-80. PMID: 18306409.
      View in: PubMed
    52. Hernando D, Kellman P, Haldar JP, Liang ZP. A network flow method for improved MR field map estimation in the presence of water and fat. Conf Proc IEEE Eng Med Biol Soc. 2008; 2008:82-5. PMID: 19162599.
      View in: PubMed
    53. Haldar JP, Wu TH, Wang Q, Chen CI, Song SK, Liang ZP. Further development in anatomically constrained MR image reconstruction: application to multimodal imaging of mouse stroke. Conf Proc IEEE Eng Med Biol Soc. 2008; 2008:422-5. PMID: 19162683.
      View in: PubMed
    54. Haldar JP, Liang ZP. High-resolution diffusion MRI. Conf Proc IEEE Eng Med Biol Soc. 2007; 2007:311-4. PMID: 18001952.
      View in: PubMed
    55. Haldar JP, Hernando D, Budde MD, Wang Q, Song SK, Liang ZP. High-resolution MR metabolic imaging. Conf Proc IEEE Eng Med Biol Soc. 2007; 2007:4324-6. PMID: 18002959.
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    56. Ying L, Haldar J, Liang ZP. An efficient non-iterative reconstruction algorithm for parallel MRI with arbitrary k-space trajectories. Conf Proc IEEE Eng Med Biol Soc. 2005; 2:1344-7. PMID: 17282445.
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