David Daniel Alesse Bogumil

Title(s)Postdoctoral Scholar - Research Associate
SchoolKeck School of Medicine of Usc
Address1450 Biggy Street
Health Sciences Campus
Los Angeles CA 90033
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Breast, Colorectal, and Prostate Cancer Incidence among Filipino Americans by Generational Status in the Multiethnic Cohort Study. Cancer Epidemiol Biomarkers Prev. 2024 Oct 02; 33(10):1311-1317. Abe JV, Legaspi J, Guillermo C, Bogumil D, Setiawan VW, Le Marchand L, Hernandez BY, Wilkens LR, Maskarinec G. PMID: 39132985; PMCID: PMC11451936.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    2. Plasmid-encoded toxin defence mediates mutualistic microbial interactions. Nat Microbiol. 2024 Jan; 9(1):108-119. Moraïs S, Mazor M, Tovar-Herrera O, Zehavi T, Zorea A, Ifrach M, Bogumil D, Brandis A, Walter J, Elia N, Gur E, Mizrahi I. PMID: 38151647; PMCID: PMC10769881.
      View in: PubMed   Mentions: 1     Fields:    Translation:HumansAnimalsCells
    3. Excess pancreatic cancer risk due to smoking and modifying effect of quitting smoking: The Multiethnic Cohort Study. Cancer Causes Control. 2024 Mar; 35(3):541-548. Bogumil D, Stram D, Preston DL, Pandol SJ, Wu AH, McKean-Cowdin R, Conti DV, Setiawan VW. PMID: 37924460; PMCID: PMC10838846.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    4. Association of Obesity and Type 2 Diabetes with Non-Hodgkin Lymphoma: The Multiethnic Cohort. Cancer Epidemiol Biomarkers Prev. 2023 10 02; 32(10):1348-1355. Maskarinec G, Brown SM, Lee J, Bogumil D, Walsh C, Haiman CA, Setiawan VW, Shvetsov YB, Le Marchand L. PMID: 37555836; PMCID: PMC10592150.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    5. Risk Factors for Type 2 Diabetes in the Multiethnic Cohort. Can J Diabetes. 2023 Dec; 47(8):627-635.e2. Maskarinec G, Kristal BS, Wilkens LR, Quintal G, Bogumil D, Setiawan VW, Le Marchand L. PMID: 37406880; PMCID: PMC10761589.
      View in: PubMed   Mentions: 1     Fields:    Translation:Humans
    6. Interethnic Differences in Bladder Cancer Incidence and the Association between Type 2 Diabetes and Bladder Cancer in the Multiethnic Cohort Study. Cancer Res Commun. 2023 05; 3(5):755-762. Bogumil D, Cortessis VK, Wilkens LR, Le Marchand L, Haiman CA, Maskarinec G, Setiawan VW. PMID: 37377897; PMCID: PMC10153456.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    7. Risk of Alzheimer's disease and related dementia by sex and race/ethnicity: The Multiethnic Cohort Study. Alzheimers Dement. 2022 09; 18(9):1625-1634. Lim U, Wang S, Park SY, Bogumil D, Wu AH, Cheng I, Haiman CA, Le Marchand L, Wilkens LR, White L, Setiawan VW. PMID: 34882963; PMCID: PMC9177893.
      View in: PubMed   Mentions: 18     Fields:    Translation:Humans
    8. Marijuana use and perinatal outcomes in obstetric patients at a safety net hospital. Eur J Obstet Gynecol Reprod Biol. 2021 Nov; 266:36-41. Sasso EB, Bolshakova M, Bogumil D, Johnson B, Komatsu E, Sternberg J, Cortessis V, Mullin P. PMID: 34562806.
      View in: PubMed   Mentions: 4     Fields:    Translation:Humans
    9. Genome-wide association study of pancreatic fat: The Multiethnic Cohort Adiposity Phenotype Study. PLoS One. 2021; 16(7):e0249615. Streicher SA, Lim U, Park SL, Li Y, Sheng X, Hom V, Xia L, Pooler L, Shepherd J, Loo LWM, Darst BF, Highland HM, Polfus LM, Bogumil D, Ernst T, Buchthal S, Franke AA, Setiawan VW, Tiirikainen M, Wilkens LR, Haiman CA, Stram DO, Cheng I, Le Marchand L. PMID: 34329319; PMCID: PMC8323875.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    10. The association between ambient air pollutants and pancreatic cancer in the Multiethnic Cohort Study. Environ Res. 2021 11; 202:111608. Bogumil D, Wu AH, Stram D, Yang J, Tseng CC, Le Marchand L, Wu J, Cheng I, Setiawan VW. PMID: 34214566; PMCID: PMC8578294.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansPHPublic Health
    11. Association of Genetic Risk Score With NAFLD in An Ethnically Diverse Cohort. Hepatol Commun. 2021 10; 5(10):1689-1703. Wang J, Conti DV, Bogumil D, Sheng X, Noureddin M, Wilkens LR, Le Marchand L, Rosen HR, Haiman CA, Setiawan VW. PMID: 34558842; PMCID: PMC8485887.
      View in: PubMed   Mentions: 23     Fields:    Translation:Humans
    12. Red meat consumption, cooking mutagens, NAT1/2 genotypes and pancreatic cancer risk in two ethnically diverse prospective cohorts. Int J Cancer. 2021 Apr 12. Huang BZ, Wang S, Bogumil D, Wilkens LR, Wu L, Blot WJ, Zheng W, Shu XO, Pandol SJ, Le Marchand L, Setiawan VW. PMID: 33844845; PMCID: PMC8594451.
      View in: PubMed   Mentions: 4     Fields:    
    13. Replication and Genetic Risk Score Analysis for Pancreatic Cancer in a Diverse Multiethnic Population. Cancer Epidemiol Biomarkers Prev. 2020 12; 29(12):2686-2692. Bogumil D, Conti DV, Sheng X, Xia L, Shu XO, Pandol SJ, Blot WJ, Zheng W, Le Marchand L, Haiman CA, Setiawan VW. PMID: 32958499; PMCID: PMC7710597.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    14. Genome-wide association meta-analysis identifies GP2 gene risk variants for pancreatic cancer. Nat Commun. 2020 06 24; 11(1):3175. Lin Y, Nakatochi M, Hosono Y, Ito H, Kamatani Y, Inoko A, Sakamoto H, Kinoshita F, Kobayashi Y, Ishii H, Ozaka M, Sasaki T, Matsuyama M, Sasahira N, Morimoto M, Kobayashi S, Fukushima T, Ueno M, Ohkawa S, Egawa N, Kuruma S, Mori M, Nakao H, Adachi Y, Okuda M, Osaki T, Kamiya S, Wang C, Hara K, Shimizu Y, Miyamoto T, Hayashi Y, Ebi H, Kohmoto T, Imoto I, Kasugai Y, Murakami Y, Akiyama M, Ishigaki K, Matsuda K, Hirata M, Shimada K, Okusaka T, Kawaguchi T, Takahashi M, Watanabe Y, Kuriki K, Kadota A, Okada R, Mikami H, Takezaki T, Suzuki S, Yamaji T, Iwasaki M, Sawada N, Goto A, Kinoshita K, Fuse N, Katsuoka F, Shimizu A, Nishizuka SS, Tanno K, Suzuki K, Okada Y, Horikoshi M, Yamauchi T, Kadowaki T, Yu H, Zhong J, Amundadottir LT, Doki Y, Ishii H, Eguchi H, Bogumil D, Haiman CA, Le Marchand L, Mori M, Risch H, Setiawan VW, Tsugane S, Wakai K, Yoshida T, Matsuda F, Kubo M, Kikuchi S, Matsuo K. PMID: 32581250; PMCID: PMC7314803.
      View in: PubMed   Mentions: 23     Fields:    Translation:HumansCells
    15. Incident testicular cancer in relation to using marijuana and smoking tobacco: A systematic review and meta-analysis of epidemiologic studies. Urol Oncol. 2020 07; 38(7):642.e1-642.e9. Song A, Myung NK, Bogumil D, Ihenacho U, Burg ML, Cortessis VK. PMID: 32409200.
      View in: PubMed   Mentions: 11     Fields:    Translation:HumansAnimals
    16. A Systematic Review of the Efficacy of Preclinical Models of Lung Cancer Drugs. Front Oncol. 2020; 10:591. Pan E, Bogumil D, Cortessis V, Yu S, Nieva J. PMID: 32391273; PMCID: PMC7190806.
      View in: PubMed   Mentions: 14  
    17. Reply to: Comment on "Comparing the two-finger versus two-thumb technique for single person infant CPR: A systematic review and meta-analysis". Resuscitation. 2020 05; 150:196. Millin MG, Bogumil D, Fishe JN, Burke RV. PMID: 32220581.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    18. Comparing the two-finger versus two-thumb technique for single person infant CPR: A systematic review and meta-analysis. Resuscitation. 2020 03 01; 148:161-172. Millin MG, Bogumil D, Fishe JN, Burke RV. PMID: 31972228.
      View in: PubMed   Mentions: 5     Fields:    Translation:Humans
    19. Unravelling plasmidome distribution and interaction with its hosting microbiome. Environ Microbiol. 2020 01; 22(1):32-44. Brown Kav A, Rozov R, Bogumil D, Sørensen SJ, Hansen LH, Benhar I, Halperin E, Shamir R, Mizrahi I. PMID: 31602783.
      View in: PubMed   Mentions: 13     Fields:    Translation:AnimalsCells
    20. FEAST: fast expectation-maximization for microbial source tracking. Nat Methods. 2019 07; 16(7):627-632. Shenhav L, Thompson M, Joseph TA, Briscoe L, Furman O, Bogumil D, Mizrahi I, Pe'er I, Halperin E. PMID: 31182859; PMCID: PMC8535041.
      View in: PubMed   Mentions: 133     Fields:    Translation:HumansCells
    21. Man-made microbial resistances in built environments. Nat Commun. 2019 02 27; 10(1):968. Mahnert A, Moissl-Eichinger C, Zojer M, Bogumil D, Mizrahi I, Rattei T, Martinez JL, Berg G. PMID: 30814504; PMCID: PMC6393488.
      View in: PubMed   Mentions: 76     Fields:    Translation:HumansCellsPHPublic Health
    22. High-Quality Diets Are Associated With Reduced Risk of Hepatocellular Carcinoma and Chronic Liver Disease: The Multiethnic Cohort. Hepatol Commun. 2019 Mar; 3(3):437-447. Bogumil D, Park SY, Le Marchand L, Haiman CA, Wilkens LR, Boushey CJ, Setiawan VW. PMID: 30859154; PMCID: PMC6396362.
      View in: PubMed   Mentions: 19     Fields:    
    23. A proteomics approach for the identification of species-specific immunogenic proteins in the Mycobacterium abscessus complex. Microbes Infect. 2019 Apr - May; 21(3-4):154-162. Steindor M, Nkwouano V, Stefanski A, Stuehler K, Ioerger TR, Bogumil D, Jacobsen M, Mackenzie CR, Kalscheuer R. PMID: 30445130.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansCells
    24. Two-thumb-encircling advantageous for lay responder infant CPR: a randomised manikin study. Arch Dis Child. 2019 06; 104(6):530-534. Pellegrino JL, Bogumil D, Epstein JL, Burke RV. PMID: 30007942.
      View in: PubMed   Mentions: 7     Fields:    Translation:Humans
    25. Pediatric dog bites: a population-based profile. Inj Prev. 2019 08; 25(4):290-294. Fein J, Bogumil D, Upperman JS, Burke RV. PMID: 29439149.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansAnimals
    26. Prevalence of nonaccidental trauma among children at American College of Surgeons-verified pediatric trauma centers. J Trauma Acute Care Surg. 2017 11; 83(5):862-866. Bogumil DDA, Demeter NE, Kay Imagawa K, Upperman JS, Burke RV. PMID: 29068874.
      View in: PubMed   Mentions: 8     Fields:    Translation:Humans
    27. Recycler: an algorithm for detecting plasmids from de novo assembly graphs. Bioinformatics. 2017 02 15; 33(4):475-482. Rozov R, Brown Kav A, Bogumil D, Shterzer N, Halperin E, Mizrahi I, Shamir R. PMID: 28003256; PMCID: PMC5408804.
      View in: PubMed   Mentions: 75     Fields:    Translation:Cells
    28. Evolution of Chaperonin Gene Duplication in Stigonematalean Cyanobacteria (Subsection V). Genome Biol Evol. 2017 01 01; 9(1):241-252. Weissenbach J, Ilhan J, Bogumil D, Hülter N, Stucken K, Dagan T. PMID: 28082600; PMCID: PMC5381637.
      View in: PubMed   Mentions: 6     Fields:    Translation:Cells
    29. DnaK-Dependent Accelerated Evolutionary Rate in Prokaryotes. Genome Biol Evol. 2016 06 03; 8(5):1590-9. Kadibalban AS, Bogumil D, Landan G, Dagan T. PMID: 27189986; PMCID: PMC4898814.
      View in: PubMed   Mentions: 15     Fields:    Translation:Cells
    30. Integration of two ancestral chaperone systems into one: the evolution of eukaryotic molecular chaperones in light of eukaryogenesis. Mol Biol Evol. 2014 Feb; 31(2):410-8. Bogumil D, Alvarez-Ponce D, Landan G, McInerney JO, Dagan T. PMID: 24188869; PMCID: PMC3907059.
      View in: PubMed   Mentions: 10     Fields:    Translation:AnimalsCells
    31. Cumulative impact of chaperone-mediated folding on genome evolution. Biochemistry. 2012 Dec 18; 51(50):9941-53. Bogumil D, Dagan T. PMID: 23167595.
      View in: PubMed   Mentions: 28     Fields:    Translation:HumansAnimalsCells
    32. Chaperones divide yeast proteins into classes of expression level and evolutionary rate. Genome Biol Evol. 2012; 4(5):618-25. Bogumil D, Landan G, Ilhan J, Dagan T. PMID: 22417914; PMCID: PMC3381671.
      View in: PubMed   Mentions: 13     Fields:    Translation:AnimalsCells
    33. Chaperonin-dependent accelerated substitution rates in prokaryotes. Genome Biol Evol. 2010; 2:602-8. Bogumil D, Dagan T. PMID: 20660111; PMCID: PMC3296371.
      View in: PubMed   Mentions: 32     Fields:    Translation:Cells
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