Birgit Schilling

Title(s)Adjunct Lecturer
SchoolSchool of Gerontology
Address3715 Mcclintock Ave.
University Park Campus
Los Angeles CA 90089
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    1. Judith Campisi (1948-2024). Nat Cell Biol. 2024 Apr 08. Melov S, Schilling B, Ellerby LM, Kapahi P. PMID: 38589533.
      View in: PubMed   Mentions:
    2. A Fully-Automated Senescence Test (FAST) for the high-throughput quantification of senescence-associated markers. bioRxiv. 2024 Mar 12. Neri F, Takajjart SN, Lerner CA, Desprez PY, Schilling B, Campisi J, Gerencser AA. PMID: 38187756; PMCID: PMC10769423.
      View in: PubMed   Mentions:
    3. Regulation of urea cycle by reversible high-stoichiometry lysine succinylation. Nat Metab. 2024 Mar; 6(3):550-566. Zhang R, Fang J, Xie X, Carrico C, Meyer JG, Wei L, Bons J, Rose J, Riley R, Kwok R, Ashok Kumaar PV, Zhang Y, He W, Nishida Y, Liu X, Locasale JW, Schilling B, Verdin E. PMID: 38448615.
      View in: PubMed   Mentions:    Fields:    Translation:Animals
    4. KIBRA repairs synaptic plasticity and promotes resilience to tauopathy-related memory loss. J Clin Invest. 2024 Feb 01; 134(3). Kauwe G, Pareja-Navarro KA, Yao L, Chen JH, Wong I, Saloner R, Cifuentes H, Nana AL, Shah S, Li Y, Le D, Spina S, Grinberg LT, Seeley WW, Kramer JH, Sacktor TC, Schilling B, Gan L, Casaletto KB, Tracy TE. PMID: 38299587; PMCID: PMC10836803.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimals
    5. OXR1 maintains the retromer to delay brain aging under dietary restriction. Nat Commun. 2024 Jan 11; 15(1):467. Wilson KA, Bar S, Dammer EB, Carrera EM, Hodge BA, Hilsabeck TAU, Bons J, Brownridge GW, Beck JN, Rose J, Granath-Panelo M, Nelson CS, Qi G, Gerencser AA, Lan J, Afenjar A, Chawla G, Brem RB, Campeau PM, Bellen HJ, Schilling B, Seyfried NT, Ellerby LM, Kapahi P. PMID: 38212606; PMCID: PMC10784588.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    6. Brain transcriptomic, metabolic and mitohormesis properties associated with N-propargylglycine treatment: A prevention strategy against neurodegeneration. Brain Res. 2024 03 01; 1826:148733. Teramayi F, Bons J, Scott M, Scott GK, Loureiro A, Lopez-Ramirez A, Schilling B, Ellerby LM, Benz CC. PMID: 38128812.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimalsCells
    7. Amyloid β accelerates age-related proteome-wide protein insolubility. bioRxiv. 2023 Dec 09. Anderton E, Chamoli M, Bhaumik D, King CD, Xie X, Foulger A, Andersen JK, Schilling B, Lithgow GJ. PMID: 37503138; PMCID: PMC10369951.
      View in: PubMed   Mentions:
    8. Proteomic analysis of X-linked dystonia parkinsonism disease striatal neurons reveals altered RNA metabolism and splicing. Neurobiol Dis. 2024 Jan; 190:106367. Tshilenge KT, Bons J, Aguirre CG, Geronimo-Olvera C, Shah S, Rose J, Gerencser AA, Mak SK, Ehrlich ME, Bragg DC, Schilling B, Ellerby LM. PMID: 38042508.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    9. Neuronal Glycogen Breakdown Mitigates Tauopathy via Pentose Phosphate Pathway-Mediated Oxidative Stress Reduction. Res Sq. 2023 Nov 08. Bar S, Wilson KA, Hilsabeck TAU, Alderfer S, Dammer EB, Burton JB, Shah S, Holtz A, Carrera EM, Beck JN, Chen JH, Kauwe G, Tracy TE, Seyfried NT, Schilling B, Ellerby LM, Kapahi P. PMID: 37986935; PMCID: PMC10659530.
      View in: PubMed   Mentions:
    10. Calorie restriction modulates the transcription of genes related to stress response and longevity in human muscle: The CALERIE study. Aging Cell. 2023 Dec; 22(12):e13963. Das JK, Banskota N, Candia J, Griswold ME, Orenduff M, de Cabo R, Corcoran DL, Das SK, De S, Huffman KM, Kraus VB, Kraus WE, Martin CK, Racette SB, Redman LM, Schilling B, Belsky DW, Ferrucci L. PMID: 37823711; PMCID: PMC10726900.
      View in: PubMed   Mentions: 2     Fields:    Translation:Humans
    11. Deep coverage and quantification of the bone proteome provides enhanced opportunities for new discoveries in skeletal biology and disease. PLoS One. 2023; 18(10):e0292268. Rose JP, Schurman CA, King CD, Bons J, Patel SK, Burton JB, O'Broin A, Alliston T, Schilling B. PMID: 37816044; PMCID: PMC10564166.
      View in: PubMed   Mentions:    Fields:    Translation:Humans
    12. Substantial downregulation of mitochondrial and peroxisomal proteins during acute kidney injury revealed by data-independent acquisition proteomics. Proteomics. 2024 Mar; 24(5):e2300162. Burton JB, Silva-Barbosa A, Bons J, Rose J, Pfister K, Simona F, Gandhi T, Reiter L, Bernhardt O, Hunter CL, Goetzman ES, Sims-Lucas S, Schilling B. PMID: 37775337.
      View in: PubMed   Mentions: 3     Fields:    Translation:HumansAnimalsCells
    13. Localization and Quantification of Post-Translational Modifications of Proteins Using Electron Activated Dissociation Fragmentation on a Fast-Acquisition Time-of-Flight Mass Spectrometer. J Am Soc Mass Spectrom. 2023 Oct 04; 34(10):2199-2210. Bons J, Hunter CL, Chupalov R, Causon J, Antonoplis A, Rose J, MacLean B, Schilling B. PMID: 37694881.
      View in: PubMed   Mentions:    Fields:    Translation:Cells
    14. Role of the Senescence-Associated Factor Dipeptidyl Peptidase 4 in the Pathogenesis of SARS-CoV-2 Infection. Aging Dis. 2023 Sep 03. Deinhardt-Emmer S, Deshpande S, Kitazawa K, Herman AB, Bons J, Rose JP, Kumar PA, Anerillas C, Neri F, Ciotlos S, Perez K, Köse-Vogel N, Häder A, Abdelmohsen K, Löffler B, Gorospe M, Desprez PY, Melov S, Furman D, Schilling B, Campisi J. PMID: 37728586.
      View in: PubMed   Mentions:
    15. Therapeutic targeting of HYPDH/PRODH2 with N-propargylglycine offers a Hyperoxaluria treatment opportunity. Biochim Biophys Acta Mol Basis Dis. 2024 01; 1870(1):166848. Bons J, Tadeo A, Scott GK, Teramayi F, Tanner JJ, Schilling B, Benz CC, Ellerby LM. PMID: 37586438; PMCID: PMC10854995.
      View in: PubMed   Mentions:    Fields:    Translation:Animals
    16. A natural variation-based screen in mouse cells reveals USF2 as a regulator of the DNA damage response and cellular senescence. G3 (Bethesda). 2023 07 05; 13(7). Kang T, Moore EC, Kopania EEK, King CD, Schilling B, Campisi J, Good JM, Brem RB. PMID: 37097016; PMCID: PMC10320765.
      View in: PubMed   Mentions:    Fields:    Translation:Animals
    17. KIBRA repairs synaptic plasticity and promotes resilience to tauopathy-related memory loss. bioRxiv. 2023 Jun 12. Kauwe G, Pareja-Navarro KA, Yao L, Chen JH, Wong I, Saloner R, Cifuentes H, Nana AL, Shah S, Li Y, Le D, Spina S, Grinberg LT, Seeley WW, Kramer JH, Sacktor TC, Schilling B, Gan L, Casaletto KB, Tracy TE. PMID: 37398236; PMCID: PMC10312627.
      View in: PubMed   Mentions:
    18. Coenzyme A binding sites induce proximal acylation across protein families. Sci Rep. 2023 03 28; 13(1):5029. Carrico C, Cruz A, Walter M, Meyer J, Wehrfritz C, Shah S, Wei L, Schilling B, Verdin E. PMID: 36977698; PMCID: PMC10050154.
      View in: PubMed   Mentions: 2     Fields:    Translation:Cells
    19. Proteomic Analysis of Huntington's Disease Medium Spiny Neurons Identifies Alterations in Lipid Droplets. Mol Cell Proteomics. 2023 05; 22(5):100534. Tshilenge KT, Aguirre CG, Bons J, Gerencser AA, Basisty N, Song S, Rose J, Lopez-Ramirez A, Naphade S, Loureiro A, Battistoni E, Milani M, Wehrfritz C, Holtz A, Hetz C, Mooney SD, Schilling B, Ellerby LM. PMID: 36958627; PMCID: PMC10165459.
      View in: PubMed   Mentions:    Fields:    Translation:HumansAnimalsCells
    20. Molecular and Cellular Crosstalk between Bone and Brain: Accessing Bidirectional Neural and Musculoskeletal Signaling during Aging and Disease. J Bone Metab. 2023 02; 30(1):1-29. Schurman CA, Burton JB, Rose J, Ellerby LM, Alliston T, Schilling B. PMID: 36950837; PMCID: PMC10036181.
      View in: PubMed   Mentions: 2  
    21. In-depth analysis of the Sirtuin 5-regulated mouse brain malonylome and succinylome using library-free data-independent acquisitions. Proteomics. 2023 02; 23(3-4):e2100371. Bons J, Rose J, Zhang R, Burton JB, Carrico C, Verdin E, Schilling B. PMID: 36479818; PMCID: PMC10363399.
      View in: PubMed   Mentions: 1     Fields:    Translation:AnimalsCells
    22. Data-independent acquisition and quantification of extracellular matrix from human lung in chronic inflammation-associated carcinomas. Proteomics. 2023 04; 23(7-8):e2200021. Bons J, Pan D, Shah S, Bai R, Chen-Tanyolac C, Wang X, Elliott DRF, Urisman A, O'Broin A, Basisty N, Rose J, Sangwan V, Camilleri-Broët S, Tankel J, Gascard P, Ferri L, Tlsty TD, Schilling B. PMID: 36228107; PMCID: PMC10391693.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    23. TurnoveR: A Skyline External Tool for Analysis of Protein Turnover in Metabolic Labeling Studies. J Proteome Res. 2023 02 03; 22(2):311-322. Basisty N, Shulman N, Wehrfritz C, Marsh AN, Shah S, Rose J, Ebert S, Miller M, Dai DF, Rabinovitch PS, Adams CM, MacCoss MJ, MacLean B, Schilling B. PMID: 36165806; PMCID: PMC10066879.
      View in: PubMed   Mentions: 3     Fields:    Translation:Cells
    24. SIRT5 is a proviral factor that interacts with SARS-CoV-2 Nsp14 protein. PLoS Pathog. 2022 09; 18(9):e1010811. Walter M, Chen IP, Vallejo-Gracia A, Kim IJ, Bielska O, Lam VL, Hayashi JM, Cruz A, Shah S, Soveg FW, Gross JD, Krogan NJ, Jerome KR, Schilling B, Ott M, Verdin E. PMID: 36095012; PMCID: PMC9499238.
      View in: PubMed   Mentions: 12     Fields:    Translation:HumansCells
    25. Comprehensive proteomic quantification of bladder stone progression in a cystinuric mouse model using data-independent acquisitions. PLoS One. 2022; 17(6):e0250137. Rose J, Basisty N, Zee T, Wehrfritz C, Bose N, Desprez PY, Kapahi P, Stoller M, Schilling B. PMID: 35771811; PMCID: PMC9246204.
      View in: PubMed   Mentions: 2     Fields:    Translation:Animals
    26. SIRT5 is a proviral factor that interacts with SARS-CoV-2 Nsp14 protein. bioRxiv. 2022 Jan 05. Walter M, Chen IP, Vallejo-Gracia A, Kim IJ, Bielska O, Lam VL, Hayashi JM, Cruz A, Shah S, Gross JD, Krogan NJ, Schilling B, Ott M, Verdin E. PMID: 35018374; PMCID: PMC8750649.
      View in: PubMed   Mentions:
    27. Proteome plasticity in response to persistent environmental change. Mol Cell. 2021 08 19; 81(16):3294-3309.e12. Domnauer M, Zheng F, Li L, Zhang Y, Chang CE, Unruh JR, Conkright-Fincham J, McCroskey S, Florens L, Zhang Y, Seidel C, Fong B, Schilling B, Sharma R, Ramanathan A, Si K, Zhou C. PMID: 34293321; PMCID: PMC8475771.
      View in: PubMed   Mentions: 8     Fields:    Translation:AnimalsCellsPHPublic Health
    28. Quantitative Proteomic Analysis of the Senescence-Associated Secretory Phenotype by Data-Independent Acquisition. Curr Protoc. 2021 Feb; 1(2):e32. Neri F, Basisty N, Desprez PY, Campisi J, Schilling B. PMID: 33524224; PMCID: PMC7898702.
      View in: PubMed   Mentions: 10     Fields:    Translation:Cells
    29. Author Correction: Senescent cells promote tissue NAD+ decline during ageing via the activation of CD38+ macrophages. Nat Metab. 2021 Jan; 3(1):120-121. Covarrubias AJ, Kale A, Perrone R, Lopez-Dominguez JA, Pisco AO, Kasler HG, Schmidt MS, Heckenbach I, Kwok R, Wiley CD, Wong HS, Gibbs E, Iyer SS, Basisty N, Wu Q, Kim IJ, Silva E, Vitangcol K, Shin KO, Lee YM, Riley R, Ben-Sahra I, Ott M, Schilling B, Scheibye-Knudsen M, Ishihara K, Quake SR, Newman J, Brenner C, Campisi J, Verdin E. PMID: 33303985.
      View in: PubMed   Mentions: 5     Fields:    
    30. Quantification and Identification of Post-Translational Modifications Using Modern Proteomics Approaches. Methods Mol Biol. 2021; 2228:225-235. Holtz A, Basisty N, Schilling B. PMID: 33950494; PMCID: PMC8710235.
      View in: PubMed   Mentions: 4     Fields:    Translation:AnimalsCells
    31. Plasma proteomic biomarker signature of age predicts health and life span. Elife. 2020 11 19; 9. Tanaka T, Basisty N, Fantoni G, Candia J, Moore AZ, Biancotto A, Schilling B, Bandinelli S, Ferrucci L. PMID: 33210602; PMCID: PMC7723412.
      View in: PubMed   Mentions: 49     Fields:    Translation:Humans
    32. Senescent cells promote tissue NAD+ decline during ageing via the activation of CD38+ macrophages. Nat Metab. 2020 11; 2(11):1265-1283. Covarrubias AJ, Kale A, Perrone R, Lopez-Dominguez JA, Pisco AO, Kasler HG, Schmidt MS, Heckenbach I, Kwok R, Wiley CD, Wong HS, Gibbs E, Iyer SS, Basisty N, Wu Q, Kim IJ, Silva E, Vitangcol K, Shin KO, Lee YM, Riley R, Ben-Sahra I, Ott M, Schilling B, Scheibye-Knudsen M, Ishihara K, Quake SR, Newman J, Brenner C, Campisi J, Verdin E. PMID: 33199924; PMCID: PMC7908681.
      View in: PubMed   Mentions: 132     Fields:    Translation:HumansAnimalsCells
    33. Quantification of Insoluble Protein Aggregation in Caenorhabditis elegans during Aging with a Novel Data-Independent Acquisition Workflow. J Vis Exp. 2020 08 07; (162). Xie X, Chamoli M, Bhaumik D, Sivapatham R, Angeli S, Andersen JK, Lithgow GJ, Schilling B. PMID: 32831297; PMCID: PMC7519758.
      View in: PubMed   Mentions: 1     Fields:    Translation:Animals
    34. The power of proteomics to monitor senescence-associated secretory phenotypes and beyond: toward clinical applications. Expert Rev Proteomics. 2020 04; 17(4):297-308. Basisty N, Kale A, Patel S, Campisi J, Schilling B. PMID: 32425074; PMCID: PMC7416420.
      View in: PubMed   Mentions: 22     Fields:    Translation:HumansAnimalsCells
    35. Simultaneous Affinity Enrichment of Two Post-Translational Modifications for Quantification and Site Localization. J Vis Exp. 2020 02 27; (156). Xie X, Shah S, Holtz A, Rose J, Basisty N, Schilling B. PMID: 32176209; PMCID: PMC7275731.
      View in: PubMed   Mentions: 4     Fields:    Translation:AnimalsCells
    36. A proteomic atlas of senescence-associated secretomes for aging biomarker development. PLoS Biol. 2020 01; 18(1):e3000599. Basisty N, Kale A, Jeon OH, Kuehnemann C, Payne T, Rao C, Holtz A, Shah S, Sharma V, Ferrucci L, Campisi J, Schilling B. PMID: 31945054; PMCID: PMC6964821.
      View in: PubMed   Mentions: 413     Fields:    Translation:HumansCells
    37. Proteome and Secretome Dynamics of Human Retinal Pigment Epithelium in Response to Reactive Oxygen Species. Sci Rep. 2019 10 28; 9(1):15440. Meyer JG, Garcia TY, Schilling B, Gibson BW, Lamba DA. PMID: 31659173; PMCID: PMC6817852.
      View in: PubMed   Mentions: 17     Fields:    Translation:HumansCells
    38. SILAC Analysis Reveals Increased Secretion of Hemostasis-Related Factors by Senescent Cells. Cell Rep. 2019 09 24; 28(13):3329-3337.e5. Wiley CD, Liu S, Limbad C, Zawadzka AM, Beck J, Demaria M, Artwood R, Alimirah F, Lopez-Dominguez JA, Kuehnemann C, Danielson SR, Basisty N, Kasler HG, Oron TR, Desprez PY, Mooney SD, Gibson BW, Schilling B, Campisi J, Kapahi P. PMID: 31553904; PMCID: PMC6907691.
      View in: PubMed   Mentions: 62     Fields:    Translation:Humans
    39. Accumulation of "Old Proteins" and the Critical Need for MS-based Protein Turnover Measurements in Aging and Longevity. Proteomics. 2020 03; 20(5-6):e1800403. Basisty N, Holtz A, Schilling B. PMID: 31408259; PMCID: PMC7015777.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansAnimalsCells
    40. Regulation of UCP1 and Mitochondrial Metabolism in Brown Adipose Tissue by Reversible Succinylation. Mol Cell. 2019 05 16; 74(4):844-857.e7. Wang G, Meyer JG, Cai W, Softic S, Li ME, Verdin E, Newgard C, Schilling B, Kahn CR. PMID: 31000437; PMCID: PMC6525068.
      View in: PubMed   Mentions: 72     Fields:    Translation:AnimalsCells
    41. Global Lysine Acetylation in Escherichia coli Results from Growth Conditions That Favor Acetate Fermentation. J Bacteriol. 2019 05 01; 201(9). Schilling B, Basisty N, Christensen DG, Sorensen D, Orr JS, Wolfe AJ, Rao CV. PMID: 30782634; PMCID: PMC6456854.
      View in: PubMed   Mentions: 17     Fields:    Translation:Cells
    42. JNK modifies neuronal metabolism to promote proteostasis and longevity. Aging Cell. 2019 06; 18(3):e12849. Wang L, Davis SS, Borch Jensen M, Rodriguez-Fernandez IA, Apaydin C, Juhasz G, Gibson BW, Schilling B, Ramanathan A, Ghaemmaghami S, Jasper H. PMID: 30810280; PMCID: PMC6516429.
      View in: PubMed   Mentions: 13     Fields:    Translation:AnimalsCells
    43. High-Resolution Mass Spectrometry to Identify and Quantify Acetylation Protein Targets. Methods Mol Biol. 2019; 1983:3-16. Schilling B, Meyer JG, Wei L, Ott M, Verdin E. PMID: 31087289; PMCID: PMC6825508.
      View in: PubMed   Mentions: 9     Fields:    Translation:AnimalsCells
    44. Temporal dynamics of liver mitochondrial protein acetylation and succinylation and metabolites due to high fat diet and/or excess glucose or fructose. PLoS One. 2018; 13(12):e0208973. Meyer JG, Softic S, Basisty N, Rardin MJ, Verdin E, Gibson BW, Ilkayeva O, Newgard CB, Kahn CR, Schilling B. PMID: 30586434; PMCID: PMC6306174.
      View in: PubMed   Mentions: 26     Fields:    Translation:HumansAnimalsCells
    45. Identifying ubiquitinated proteins and aggregates. Aging (Albany NY). 2018 10 18; 10(10):2549-2550. Basisty N, Schilling B, Rabinovitch PS. PMID: 30335616; PMCID: PMC6224256.
      View in: PubMed   Mentions: 3     Fields:    
    46. Simultaneous Quantification of the Acetylome and Succinylome by 'One-Pot' Affinity Enrichment. Proteomics. 2018 09; 18(17):e1800123. Basisty N, Meyer JG, Wei L, Gibson BW, Schilling B. PMID: 30035354; PMCID: PMC6175148.
      View in: PubMed   Mentions: 19     Fields:    Translation:AnimalsCells
    47. Quantification of Site-specific Protein Lysine Acetylation and Succinylation Stoichiometry Using Data-independent Acquisition Mass Spectrometry. J Vis Exp. 2018 04 04; (134). Wei L, Meyer JG, Schilling B. PMID: 29683460; PMCID: PMC5933372.
      View in: PubMed   Mentions: 5     Fields:    Translation:Cells
    48. Protein Turnover in Aging and Longevity. Proteomics. 2018 03; 18(5-6):e1700108. Basisty N, Meyer JG, Schilling B. PMID: 29453826; PMCID: PMC6022828.
      View in: PubMed   Mentions: 48     Fields:    Translation:HumansAnimalsCells
    49. Characterization of Inner and Outer Membrane Proteins from Francisella tularensis Strains LVS and Schu S4 and Identification of Potential Subunit Vaccine Candidates. mBio. 2017 10 10; 8(5). Post DMB, Slütter B, Schilling B, Chande AT, Rasmussen JA, Jones BD, D'Souza AK, Reinders LM, Harty JT, Gibson BW, Apicella MA. PMID: 29018123; PMCID: PMC5635693.
      View in: PubMed   Mentions: 12     Fields:    Translation:AnimalsCellsPHPublic Health
    50. PIQED: automated identification and quantification of protein modifications from DIA-MS data. Nat Methods. 2017 06 29; 14(7):646-647. Meyer JG, Mukkamalla S, Steen H, Nesvizhskii AI, Gibson BW, Schilling B. PMID: 28661500; PMCID: PMC5663633.
      View in: PubMed   Mentions: 18     Fields:    Translation:Cells
    51. Identification and characterization of AckA-dependent protein acetylation in Neisseria gonorrhoeae. PLoS One. 2017; 12(6):e0179621. Post DMB, Schilling B, Reinders LM, D'Souza AK, Ketterer MR, Kiel SJ, Chande AT, Apicella MA, Gibson BW. PMID: 28654654; PMCID: PMC5487020.
      View in: PubMed   Mentions: 11     Fields:    Translation:Cells
    52. Clinical applications of quantitative proteomics using targeted and untargeted data-independent acquisition techniques. Expert Rev Proteomics. 2017 05; 14(5):419-429. Meyer JG, Schilling B. PMID: 28436239; PMCID: PMC5671767.
      View in: PubMed   Mentions: 59     Fields:    Translation:Humans
    53. Generation of High-Quality SWATH® Acquisition Data for Label-free Quantitative Proteomics Studies Using TripleTOF® Mass Spectrometers. Methods Mol Biol. 2017; 1550:223-233. Schilling B, Gibson BW, Hunter CL. PMID: 28188533; PMCID: PMC5669615.
      View in: PubMed   Mentions: 39     Fields:    
    54. Vitamin D Promotes Protein Homeostasis and Longevity via the Stress Response Pathway Genes skn-1, ire-1, and xbp-1. Cell Rep. 2016 10 25; 17(5):1227-1237. Mark KA, Dumas KJ, Bhaumik D, Schilling B, Davis S, Oron TR, Sorensen DJ, Lucanic M, Brem RB, Melov S, Ramanathan A, Gibson BW, Lithgow GJ. PMID: 27783938; PMCID: PMC5689451.
      View in: PubMed   Mentions: 38     Fields:    Translation:AnimalsCells
    55. Quantification of Lysine Acetylation and Succinylation Stoichiometry in Proteins Using Mass Spectrometric Data-Independent Acquisitions (SWATH). J Am Soc Mass Spectrom. 2016 11; 27(11):1758-1771. Meyer JG, D'Souza AK, Sorensen DJ, Rardin MJ, Wolfe AJ, Gibson BW, Schilling B. PMID: 27590315; PMCID: PMC5059418.
      View in: PubMed   Mentions: 37     Fields:    Translation:Cells
    56. Multiplexed, Scheduled, High-Resolution Parallel Reaction Monitoring on a Full Scan QqTOF Instrument with Integrated Data-Dependent and Targeted Mass Spectrometric Workflows. Anal Chem. 2015 Oct 20; 87(20):10222-9. Schilling B, MacLean B, Held JM, Sahu AK, Rardin MJ, Sorensen DJ, Peters T, Wolfe AJ, Hunter CL, MacCoss MJ, Gibson BW. PMID: 26398777; PMCID: PMC5677521.
      View in: PubMed   Mentions: 41     Fields:    Translation:AnimalsCells
    57. Protein acetylation dynamics in response to carbon overflow in Escherichia coli. Mol Microbiol. 2015 Dec; 98(5):847-63. Schilling B, Christensen D, Davis R, Sahu AK, Hu LI, Walker-Peddakotla A, Sorensen DJ, Zemaitaitis B, Gibson BW, Wolfe AJ. PMID: 26264774; PMCID: PMC4715485.
      View in: PubMed   Mentions: 73     Fields:    Translation:Cells
    58. Integration-independent Transgenic Huntington Disease Fragment Mouse Models Reveal Distinct Phenotypes and Life Span in Vivo. J Biol Chem. 2015 Jul 31; 290(31):19287-306. O'Brien R, DeGiacomo F, Holcomb J, Bonner A, Ring KL, Zhang N, Zafar K, Weiss A, Lager B, Schilling B, Gibson BW, Chen S, Kwak S, Ellerby LM. PMID: 26025364; PMCID: PMC4521048.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansAnimalsCells
    59. MS1 Peptide Ion Intensity Chromatograms in MS2 (SWATH) Data Independent Acquisitions. Improving Post Acquisition Analysis of Proteomic Experiments. Mol Cell Proteomics. 2015 Sep; 14(9):2405-19. Rardin MJ, Schilling B, Cheng LY, MacLean BX, Sorensen DJ, Sahu AK, MacCoss MJ, Vitek O, Gibson BW. PMID: 25987414; PMCID: PMC4563724.
      View in: PubMed   Mentions: 29     Fields:    Translation:Animals
    60. Iron promotes protein insolubility and aging in C. elegans. Aging (Albany NY). 2014 Nov; 6(11):975-91. Klang IM, Schilling B, Sorensen DJ, Sahu AK, Kapahi P, Andersen JK, Swoboda P, Killilea DW, Gibson BW, Lithgow GJ. PMID: 25554795; PMCID: PMC4276790.
      View in: PubMed   Mentions: 31     Fields:    Translation:Animals
    61. RPL24: a potential therapeutic target whose depletion or acetylation inhibits polysome assembly and cancer cell growth. Oncotarget. 2014 Jul 15; 5(13):5165-76. Wilson-Edell KA, Kehasse A, Scott GK, Yau C, Rothschild DE, Schilling B, Gabriel BS, Yevtushenko MA, Hanson IM, Held JM, Gibson BW, Benz CC. PMID: 24970821; PMCID: PMC4148130.
      View in: PubMed   Mentions: 21     Fields:    Translation:HumansCells
    62. Variation and quantification among a target set of phosphopeptides in human plasma by multiple reaction monitoring and SWATH-MS2 data-independent acquisition. Electrophoresis. 2014 Dec; 35(24):3487-97. Zawadzka AM, Schilling B, Held JM, Sahu AK, Cusack MP, Drake PM, Fisher SJ, Gibson BW. PMID: 24853916; PMCID: PMC4565165.
      View in: PubMed   Mentions: 8     Fields:    Translation:HumansCells
    63. A framework for installable external tools in Skyline. Bioinformatics. 2014 Sep 01; 30(17):2521-3. Broudy D, Killeen T, Choi M, Shulman N, Mani DR, Abbatiello SE, Mani D, Ahmad R, Sahu AK, Schilling B, Tamura K, Boss Y, Sharma V, Gibson BW, Carr SA, Vitek O, MacCoss MJ, MacLean B. PMID: 24813211; PMCID: PMC4147880.
      View in: PubMed   Mentions: 16     Fields:    
    64. Site-specific acylation changes in the lipid A of Escherichia coli lpxL mutants grown at high temperatures. Innate Immun. 2014 Apr; 20(3):269-82. Schilling B, Hunt J, Gibson BW, Apicella MA. PMID: 23812252; PMCID: PMC3983921.
      View in: PubMed   Mentions: 6     Fields:    Translation:Cells
    65. Label-free quantitative proteomics of the lysine acetylome in mitochondria identifies substrates of SIRT3 in metabolic pathways. Proc Natl Acad Sci U S A. 2013 Apr 16; 110(16):6601-6. Rardin MJ, Newman JC, Held JM, Cusack MP, Sorensen DJ, Li B, Schilling B, Mooney SD, Kahn CR, Verdin E, Gibson BW. PMID: 23576753; PMCID: PMC3631688.
      View in: PubMed   Mentions: 229     Fields:    Translation:AnimalsCells
    66. Ligand binding promotes CDK-dependent phosphorylation of ER-alpha on hinge serine 294 but inhibits ligand-independent phosphorylation of serine 305. Mol Cancer Res. 2012 Aug; 10(8):1120-32. Held JM, Britton DJ, Scott GK, Lee EL, Schilling B, Baldwin MA, Gibson BW, Benz CC. PMID: 22669764; PMCID: PMC3950940.
      View in: PubMed   Mentions: 14     Fields:    Translation:HumansCells
    67. Ubiquitin-specific peptidase 9, X-linked (USP9X) modulates activity of mammalian target of rapamycin (mTOR). J Biol Chem. 2012 Jun 15; 287(25):21164-75. Agrawal P, Chen YT, Schilling B, Gibson BW, Hughes RE. PMID: 22544753; PMCID: PMC3375539.
      View in: PubMed   Mentions: 29     Fields:    Translation:HumansAnimalsCells
    68. Platform-independent and label-free quantitation of proteomic data using MS1 extracted ion chromatograms in skyline: application to protein acetylation and phosphorylation. Mol Cell Proteomics. 2012 May; 11(5):202-14. Schilling B, Rardin MJ, MacLean BX, Zawadzka AM, Frewen BE, Cusack MP, Sorensen DJ, Bereman MS, Jing E, Wu CC, Verdin E, Kahn CR, Maccoss MJ, Gibson BW. PMID: 22454539; PMCID: PMC3418851.
      View in: PubMed   Mentions: 237     Fields:    Translation:HumansAnimalsCells
    69. Mass spectrometric identification of novel lysine acetylation sites in huntingtin. Mol Cell Proteomics. 2011 Oct; 10(10):M111.009829. Cong X, Held JM, DeGiacomo F, Bonner A, Chen JM, Schilling B, Czerwieniec GA, Gibson BW, Ellerby LM. PMID: 21685499; PMCID: PMC3205870.
      View in: PubMed   Mentions: 16     Fields:    Translation:HumansAnimalsCells
    70. Confident identification of 3-nitrotyrosine modifications in mass spectral data across multiple mass spectrometry platforms. J Proteomics. 2011 Oct 19; 74(11):2510-21. Li B, Held JM, Schilling B, Danielson SR, Gibson BW. PMID: 21514405; PMCID: PMC3191283.
      View in: PubMed   Mentions: 6     Fields:    Translation:HumansAnimalsCells
    71. Identification of new modulators and protein alterations in non-apoptotic programmed cell death. J Cell Biochem. 2010 Dec 15; 111(6):1401-12. Sperandio S, Poksay KS, Schilling B, Crippen D, Gibson BW, Bredesen DE. PMID: 20830744; PMCID: PMC5668132.
      View in: PubMed   Mentions: 27     Fields:    Translation:HumansCells
    72. Targeted quantitation of site-specific cysteine oxidation in endogenous proteins using a differential alkylation and multiple reaction monitoring mass spectrometry approach. Mol Cell Proteomics. 2010 Jul; 9(7):1400-10. Held JM, Danielson SR, Behring JB, Atsriku C, Britton DJ, Puckett RL, Schilling B, Campisi J, Benz CC, Gibson BW. PMID: 20233844; PMCID: PMC2938085.
      View in: PubMed   Mentions: 62     Fields:    Translation:HumansCells
    73. The Mycobacterium bovis bacille Calmette-Guerin phagosome proteome. Mol Cell Proteomics. 2010 Jan; 9(1):32-53. Lee BY, Jethwaney D, Schilling B, Clemens DL, Gibson BW, Horwitz MA. PMID: 19815536; PMCID: PMC2808266.
      View in: PubMed   Mentions: 30     Fields:    Translation:HumansCells
    74. Preferentially increased nitration of alpha-synuclein at tyrosine-39 in a cellular oxidative model of Parkinson's disease. Anal Chem. 2009 Sep 15; 81(18):7823-8. Danielson SR, Held JM, Schilling B, Oo M, Gibson BW, Andersen JK. PMID: 19697948; PMCID: PMC2748813.
      View in: PubMed   Mentions: 50     Fields:    Translation:AnimalsCells
    75. Systematic mapping of posttranslational modifications in human estrogen receptor-alpha with emphasis on novel phosphorylation sites. Mol Cell Proteomics. 2009 Mar; 8(3):467-80. Atsriku C, Britton DJ, Held JM, Schilling B, Scott GK, Gibson BW, Benz CC, Baldwin MA. PMID: 18984578; PMCID: PMC2649810.
      View in: PubMed   Mentions: 34     Fields:    Translation:HumansCells
    76. A novel serine phosphorylation site detected in the N-terminal domain of estrogen receptor isolated from human breast cancer cells. J Am Soc Mass Spectrom. 2008 May; 19(5):729-40. Britton DJ, Scott GK, Schilling B, Atsriku C, Held JM, Gibson BW, Benz CC, Baldwin MA. PMID: 18367407; PMCID: PMC7456516.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansCells
    77. Mitochondrial oxidative stress causes hyperphosphorylation of tau. PLoS One. 2007 Jun 20; 2(6):e536. Melov S, Adlard PA, Morten K, Johnson F, Golden TR, Hinerfeld D, Schilling B, Mavros C, Masters CL, Volitakis I, Li QX, Laughton K, Hubbard A, Cherny RA, Gibson B, Bush AI. PMID: 17579710; PMCID: PMC1888726.
      View in: PubMed   Mentions: 158     Fields:    Translation:AnimalsCells
    78. Characterization of lipid A acylation patterns in Francisella tularensis, Francisella novicida, and Francisella philomiragia using multiple-stage mass spectrometry and matrix-assisted laser desorption/ionization on an intermediate vacuum source linear ion trap. Anal Chem. 2007 Feb 01; 79(3):1034-42. Schilling B, McLendon MK, Phillips NJ, Apicella MA, Gibson BW. PMID: 17263332; PMCID: PMC2556175.
      View in: PubMed   Mentions: 31     Fields:    Translation:Cells
    79. Huntingtin phosphorylation sites mapped by mass spectrometry. Modulation of cleavage and toxicity. J Biol Chem. 2006 Aug 18; 281(33):23686-97. Schilling B, Gafni J, Torcassi C, Cong X, Row RH, LaFevre-Bernt MA, Cusack MP, Ratovitski T, Hirschhorn R, Ross CA, Gibson BW, Ellerby LM. PMID: 16782707.
      View in: PubMed   Mentions: 60     Fields:    Translation:HumansAnimalsCells
    80. Novel pathways associated with quinone-induced stress in breast cancer cells. Drug Metab Rev. 2006; 38(4):601-13. Benz CC, Atsriku C, Yau C, Britton D, Schilling B, Gibson BW, Baldwin MA, Scott GK. PMID: 17145690.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    81. Proteomic analysis of succinate dehydrogenase and ubiquinol-cytochrome c reductase (Complex II and III) isolated by immunoprecipitation from bovine and mouse heart mitochondria. Biochim Biophys Acta. 2006 Feb; 1762(2):213-22. Schilling B, Murray J, Yoo CB, Row RH, Cusack MP, Capaldi RA, Gibson BW. PMID: 16120479.
      View in: PubMed   Mentions: 18     Fields:    Translation:AnimalsCells
    82. A pilot proteomic study of amyloid precursor interactors in Alzheimer's disease. Ann Neurol. 2005 Aug; 58(2):277-89. Cottrell BA, Galvan V, Banwait S, Gorostiza O, Lombardo CR, Williams T, Schilling B, Peel A, Gibson B, Koo EH, Link CD, Bredesen DE. PMID: 16049941; PMCID: PMC1847583.
      View in: PubMed   Mentions: 20     Fields:    Translation:Humans
    83. Mass spectrometric identification of a novel phosphorylation site in subunit NDUFA10 of bovine mitochondrial complex I. FEBS Lett. 2005 Apr 25; 579(11):2485-90. Schilling B, Aggeler R, Schulenberg B, Murray J, Row RH, Capaldi RA, Gibson BW. PMID: 15848193.
      View in: PubMed   Mentions: 19     Fields:    Translation:HumansAnimalsCells
    84. Rapid purification and mass spectrometric characterization of mitochondrial NADH dehydrogenase (Complex I) from rodent brain and a dopaminergic neuronal cell line. Mol Cell Proteomics. 2005 Jan; 4(1):84-96. Schilling B, Bharath M M S, Row RH, Murray J, Cusack MP, Capaldi RA, Freed CR, Prasad KN, Andersen JK, Gibson BW. PMID: 15591592.
      View in: PubMed   Mentions: 22     Fields:    Translation:AnimalsCells
    85. Proteomic and immunochemical characterization of a role for stathmin in adult neurogenesis. FASEB J. 2004 Feb; 18(2):287-99. Jin K, Mao XO, Cottrell B, Schilling B, Xie L, Row RH, Sun Y, Peel A, Childs J, Gendeh G, Gibson BW, Greenberg DA. PMID: 14769823.
      View in: PubMed   Mentions: 29     Fields:    Translation:AnimalsCells
    86. Molecular components of a cell death pathway activated by endoplasmic reticulum stress. J Biol Chem. 2004 Jan 02; 279(1):177-87. Rao RV, Poksay KS, Castro-Obregon S, Schilling B, Row RH, del Rio G, Gibson BW, Ellerby HM, Bredesen DE. PMID: 14561754.
      View in: PubMed   Mentions: 54     Fields:    Translation:HumansCells
    87. MS2Assign, automated assignment and nomenclature of tandem mass spectra of chemically crosslinked peptides. J Am Soc Mass Spectrom. 2003 Aug; 14(8):834-50. Schilling B, Row RH, Gibson BW, Guo X, Young MM. PMID: 12892908.
      View in: PubMed   Mentions: 104     Fields:    Translation:AnimalsCells
    88. Cathepsin L in secretory vesicles functions as a prohormone-processing enzyme for production of the enkephalin peptide neurotransmitter. Proc Natl Acad Sci U S A. 2003 Aug 05; 100(16):9590-5. Yasothornsrikul S, Greenbaum D, Medzihradszky KF, Toneff T, Bundey R, Miller R, Schilling B, Petermann I, Dehnert J, Logvinova A, Goldsmith P, Neveu JM, Lane WS, Gibson B, Reinheckel T, Peters C, Bogyo M, Hook V. PMID: 12869695; PMCID: PMC170962.
      View in: PubMed   Mentions: 85     Fields:    Translation:AnimalsCells
    89. Metabolic incorporation of unnatural sialic acids into Haemophilus ducreyi lipooligosaccharides. Proc Natl Acad Sci U S A. 2003 Mar 18; 100(6):3089-94. Goon S, Schilling B, Tullius MV, Gibson BW, Bertozzi CR. PMID: 12615992; PMCID: PMC152251.
      View in: PubMed   Mentions: 23     Fields:    Translation:Cells
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