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Daniel Mullen

Title(s)Postdoctoral Scholar - Research Associate
SchoolKeck School of Medicine of Usc
AddressNTT 1441 Eastlake Ave
Health Sciences Campus
Los Angeles CA 90033
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    Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help. to make corrections and additions.
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    Altmetrics Details PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
    1. Tracing regulatory element networks using epigenetic traits to identify key transcription factors: TENET R/Bioconductor package. Bioinformatics. 2025 Aug 02; 41(8). Mullen DJ, Wu Z, Nelson-Moore E, Cao H, Han L, Offringa IA, Rhie SK. PMID: 40748712; PMCID: PMC12349384.
      View in: PubMed   Mentions:    Fields:    Translation:HumansCells
    2. Alveolar type I cells can give rise to KRAS-induced lung adenocarcinoma. Cell Rep. 2023 12 26; 42(12):113286. Yang M, Shen H, Flodby P, Koss MD, Bassiouni R, Liu Y, Jashashvili T, Neely A, Ogbolu E, Castillo J, Stueve TR, Mullen DJ, Ryan AL, Carpten J, Castaldi A, Wallace WD, Zhou B, Borok Z, Marconett CN. PMID: 37995179; PMCID: PMC10842735.
      View in: PubMed   Mentions: 7     Fields:    Translation:Animals
    3. The Sulfotransferase SULT1C2 Is Epigenetically Activated and Transcriptionally Induced by Tobacco Exposure and Is Associated with Patient Outcome in Lung Adenocarcinoma. Int J Environ Res Public Health. 2021 12 31; 19(1). Johnson C, Mullen DJ, Selamat SA, Campan M, Offringa IA, Marconett CN. PMID: 35010676; PMCID: PMC8744592.
      View in: PubMed   Mentions: 2     Fields:    Translation:HumansCells
    4. Endoplasmic reticulum chaperone GRP78/BiP is critical for mutant Kras-driven lung tumorigenesis. Oncogene. 2021 05; 40(20):3624-3632. Rangel DF, Dubeau L, Park R, Chan P, Ha DP, Pulido MA, Mullen DJ, Vorobyova I, Zhou B, Borok Z, Offringa IA, Lee AS. PMID: 33931739; PMCID: PMC8179725.
      View in: PubMed   Mentions: 16     Fields:    Translation:HumansAnimalsCells
    5. TENET 2.0: Identification of key transcriptional regulators and enhancers in lung adenocarcinoma. PLoS Genet. 2020 09; 16(9):e1009023. Mullen DJ, Yan C, Kang DS, Zhou B, Borok Z, Marconett CN, Farnham PJ, Offringa IA, Rhie SK. PMID: 32925947; PMCID: PMC7515200.
      View in: PubMed   Mentions: 19     Fields:    Translation:HumansCells
    6. LINC00261 Is an Epigenetically Regulated Tumor Suppressor Essential for Activation of the DNA Damage Response. Cancer Res. 2019 Jun 15; 79(12):3050-3062. Shahabi S, Kumaran V, Castillo J, Cong Z, Nandagopal G, Mullen DJ, Alvarado A, Correa MR, Saizan A, Goel R, Bhat A, Lynch SK, Zhou B, Borok Z, Marconett CN. PMID: 30796052; PMCID: PMC6571057.
      View in: PubMed   Mentions: 60     Fields:    Translation:Humans
    7. Positional integration of lung adenocarcinoma susceptibility loci with primary human alveolar epithelial cell epigenomes. Epigenomics. 2018 09; 10(9):1167-1187. Yang C, Stueve TR, Yan C, Rhie SK, Mullen DJ, Luo J, Zhou B, Borok Z, Marconett CN, Offringa IA. PMID: 30212242; PMCID: PMC6391636.
      View in: PubMed   Mentions: 10     Fields:    Translation:HumansCells
    8. Association of internal smoking dose with blood DNA methylation in three racial/ethnic populations. Clin Epigenetics. 2018 08 23; 10(1):110. Park SL, Patel YM, Loo LWM, Mullen DJ, Offringa IA, Maunakea A, Stram DO, Siegmund K, Murphy SE, Tiirikainen M, Le Marchand L. PMID: 30139389; PMCID: PMC6108111.
      View in: PubMed   Mentions: 29     Fields:    Translation:HumansCells
    9. Epigenome-wide analysis of DNA methylation in lung tissue shows concordance with blood studies and identifies tobacco smoke-inducible enhancers. Hum Mol Genet. 2017 08 01; 26(15):3014-3027. Stueve TR, Li WQ, Shi J, Marconett CN, Zhang T, Yang C, Mullen D, Yan C, Wheeler W, Hua X, Zhou B, Borok Z, Caporaso NE, Pesatori AC, Duan J, Laird-Offringa IA, Landi MT. PMID: 28854564; PMCID: PMC5886283.
      View in: PubMed   Mentions: 64     Fields:    Translation:HumansCells
    10. Allosteric regulation of SERCA by phosphorylation-mediated conformational shift of phospholamban. Proc Natl Acad Sci U S A. 2013 Oct 22; 110(43):17338-43. Gustavsson M, Verardi R, Mullen DG, Mote KR, Traaseth NJ, Gopinath T, Veglia G. PMID: 24101520; PMCID: PMC3808617.
      View in: PubMed   Mentions: 79     Fields:    Translation:AnimalsCells
    11. Synthesis and characterization of the 47-residue heterodimeric antimicrobial peptide distinctin, featuring directed disulfide bridge formation. Biopolymers. 2012; 98(5):479-84. Mullen DG, Verardi R, Porcelli F, Scaloni A, Barany G, Veglia G. PMID: 23203692; PMCID: PMC3551542.
      View in: PubMed   Mentions: 1     Fields:    Translation:Cells
    12. Photoaffinity labeling of Ras converting enzyme using peptide substrates that incorporate benzoylphenylalanine (Bpa) residues: improved labeling and structural implications. Bioorg Med Chem. 2011 Dec 15; 19(24):7559-69. Kyro K, Manandhar SP, Mullen D, Schmidt WK, Distefano MD. PMID: 22079863; PMCID: PMC3319382.
      View in: PubMed   Mentions: 9     Fields:    Translation:AnimalsCells
    13. A myristoyl/phosphoserine switch controls cAMP-dependent protein kinase association to membranes. J Mol Biol. 2011 Aug 26; 411(4):823-36. Gaffarogullari EC, Masterson LR, Metcalfe EE, Traaseth NJ, Balatri E, Musa MM, Mullen D, Distefano MD, Veglia G. PMID: 21740913; PMCID: PMC3487414.
      View in: PubMed   Mentions: 40     Fields:    Translation:HumansCells
    14. Photoaffinity labeling of Ras converting enzyme 1 (Rce1p) using a benzophenone-containing peptide substrate. Bioorg Med Chem. 2010 Aug 01; 18(15):5675-84. Kyro K, Manandhar SP, Mullen D, Schmidt WK, Distefano MD. PMID: 20619662; PMCID: PMC2965201.
      View in: PubMed   Mentions: 5     Fields:    Translation:Cells
    15. Investigation of the sequence and length dependence for cell-penetrating prenylated peptides. Bioorg Med Chem Lett. 2010 Jan 01; 20(1):161-3. Wollack JW, Zeliadt NA, Ochocki JD, Mullen DG, Barany G, Wattenberg EV, Distefano MD. PMID: 20004573; PMCID: PMC2834556.
      View in: PubMed   Mentions: 7     Fields:    Translation:HumansCells
    16. Structure and topology of monomeric phospholamban in lipid membranes determined by a hybrid solution and solid-state NMR approach. Proc Natl Acad Sci U S A. 2009 Jun 23; 106(25):10165-70. Traaseth NJ, Shi L, Verardi R, Mullen DG, Barany G, Veglia G. PMID: 19509339; PMCID: PMC2700893.
      View in: PubMed   Mentions: 98     Fields:    Translation:Cells
    17. Caged protein prenyltransferase substrates: tools for understanding protein prenylation. Chem Biol Drug Des. 2008 Sep; 72(3):171-81. DeGraw AJ, Hast MA, Xu J, Mullen D, Beese LS, Barany G, Distefano MD. PMID: 18844669; PMCID: PMC2680146.
      View in: PubMed   Mentions: 15     Fields:    Translation:HumansCells
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    NIH Funding Acknowledgment: Important - All publications resulting from the utilization of SC CTSI resources are required to credit the SC CTSI grant by including the NIH funding acknowledgment and must comply with the NIH Public Access Policy.

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