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    Anton Valouev, PhD

    TitleAssistant Professor of Preventive Medicine
    SchoolKeck School of Medicine of USC
    DepartmentPreventive Medicine
    AddressNRT 1450 Biggy Street
    Health Sciences Campus
    Los Angeles California 90033
    Phone+1 323 442 7799
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      Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Researchers can login to make corrections and additions, or contact us for help.
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      1. Wong EH, Khrunin A, Nichols L, Pushkarev D, Khokhrin D, Verbenko D, Evgrafov O, Knowles J, Novembre J, Limborska S, Valouev A. Reconstructing genetic history of Siberian and Northeastern European populations. Genome Res. 2016 Dec 13. PMID: 27965293.
        View in: PubMed
      2. O'Brien LL, Guo Q, Lee Y, Tran T, Benazet JD, Whitney PH, Valouev A, McMahon AP. Differential regulation of mouse and human nephron progenitors by the Six family of transcriptional regulators. Development. 2016 Feb 15; 143(4):595-608. PMID: 26884396.
        View in: PubMed
      3. Peng JC, Valouev A, Liu N, Lin H. Piwi maintains germline stem cells and oogenesis in Drosophila through negative regulation of Polycomb group proteins. Nat Genet. 2016 Mar; 48(3):283-91. PMID: 26780607.
        View in: PubMed
      4. Lin H, Chen M, Kundaje A, Valouev A, Yin H, Liu N, Neuenkirchen N, Zhong M, Snyder M. Reassessment of Piwi Binding to the Genome and Piwi Impact on RNA Polymerase II Distribution. Dev Cell. 2015 Mar 23; 32(6):772-4. PMID: 25805139.
        View in: PubMed
      5. Hannibal RL, Chuong EB, Rivera-Mulia JC, Gilbert DM, Valouev A, Baker JC. Copy number variation is a fundamental aspect of the placental genome. PLoS Genet. 2014 May; 10(5):e1004290. PMID: 24785991.
        View in: PubMed
      6. Valouev A, Weng Z, Sweeney RT, Varma S, Le QT, Kong C, Sidow A, West RB. Discovery of recurrent structural variants in nasopharyngeal carcinoma. Genome Res. 2014 Feb; 24(2):300-9. PMID: 24214394.
        View in: PubMed
      7. Merker JD, Valouev A, Gotlib J. Next-generation sequencing in hematologic malignancies: what will be the dividends? Ther Adv Hematol. 2012 Dec; 3(6):333-9. PMID: 23606936.
        View in: PubMed
      8. Valouev A, Johnson SM, Boyd SD, Smith CL, Fire AZ, Sidow A. Determinants of nucleosome organization in primary human cells. Nature. 2011 Jun 23; 474(7352):516-20. PMID: 21602827.
        View in: PubMed
      9. Ma Z, Swigut T, Valouev A, Rada-Iglesias A, Wysocka J. Sequence-specific regulator Prdm14 safeguards mouse ESCs from entering extraembryonic endoderm fates. Nat Struct Mol Biol. 2011 Feb; 18(2):120-7. PMID: 21183938.
        View in: PubMed
      10. Gracey LE, Chen ZY, Maniar JM, Valouev A, Sidow A, Kay MA, Fire AZ. An in vitro-identified high-affinity nucleosome-positioning signal is capable of transiently positioning a nucleosome in vivo. Epigenetics Chromatin. 2010; 3(1):13. PMID: 20594331.
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      11. Teague B, Waterman MS, Goldstein S, Potamousis K, Zhou S, Reslewic S, Sarkar D, Valouev A, Churas C, Kidd JM, Kohn S, Runnheim R, Lamers C, Forrest D, Newton MA, Eichler EE, Kent-First M, Surti U, Livny M, Schwartz DC. High-resolution human genome structure by single-molecule analysis. Proc Natl Acad Sci U S A. 2010 Jun 15; 107(24):10848-53. PMID: 20534489.
        View in: PubMed
      12. Peng JC, Valouev A, Swigut T, Zhang J, Zhao Y, Sidow A, Wysocka J. Jarid2/Jumonji coordinates control of PRC2 enzymatic activity and target gene occupancy in pluripotent cells. Cell. 2009 Dec 24; 139(7):1290-302. PMID: 20064375.
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      13. Brunner AL, Johnson DS, Kim SW, Valouev A, Reddy TE, Neff NF, Anton E, Medina C, Nguyen L, Chiao E, Oyolu CB, Schroth GP, Absher DM, Baker JC, Myers RM. Distinct DNA methylation patterns characterize differentiated human embryonic stem cells and developing human fetal liver. Genome Res. 2009 Jun; 19(6):1044-56. PMID: 19273619.
        View in: PubMed
      14. Valouev A, Johnson DS, Sundquist A, Medina C, Anton E, Batzoglou S, Myers RM, Sidow A. Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data. Nat Methods. 2008 Sep; 5(9):829-34. PMID: 19160518.
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      15. Valouev A, Ichikawa J, Tonthat T, Stuart J, Ranade S, Peckham H, Zeng K, Malek JA, Costa G, McKernan K, Sidow A, Fire A, Johnson SM. A high-resolution, nucleosome position map of C. elegans reveals a lack of universal sequence-dictated positioning. Genome Res. 2008 Jul; 18(7):1051-63. PMID: 18477713.
        View in: PubMed
      16. Li H, Valouev A, Schwartz DC, Waterman MS, Li LM. A quantile method for sizing optical maps. J Comput Biol. 2007 Apr; 14(3):255-66. PMID: 17563310.
        View in: PubMed
      17. Valouev A, Schwartz DC, Zhou S, Waterman MS. An algorithm for assembly of ordered restriction maps from single DNA molecules. Proc Natl Acad Sci U S A. 2006 Oct 24; 103(43):15770-5. PMID: 17043225.
        View in: PubMed
      18. Valouev A, Li L, Liu YC, Schwartz DC, Yang Y, Zhang Y, Waterman MS. Alignment of optical maps. J Comput Biol. 2006 Mar; 13(2):442-62. PMID: 16597251.
        View in: PubMed
      19. Valouev A, Zhang Y, Schwartz DC, Waterman MS. Refinement of optical map assemblies. Bioinformatics. 2006 May 15; 22(10):1217-24. PMID: 16500933.
        View in: PubMed
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